Variant report
| Variant | rs12108575 |
|---|---|
| Chromosome Location | chr4:85557138-85557139 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:85518600-85574800 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr4:85520400-85559400 | Weak transcription | Fetal Heart | heart |
| 3 | chr4:85525000-85564200 | Weak transcription | Placenta | Placenta |
| 4 | chr4:85526800-85583000 | Weak transcription | Gastric | stomach |
| 5 | chr4:85528400-85564000 | Weak transcription | Fetal Kidney | kidney |
| 6 | chr4:85529400-85581600 | Weak transcription | Ovary | ovary |
| 7 | chr4:85529600-85587600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 8 | chr4:85532400-85571200 | Weak transcription | Pancreas | Pancrea |
| 9 | chr4:85536800-85570200 | Weak transcription | Fetal Stomach | stomach |
| 10 | chr4:85537200-85568600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 11 | chr4:85538600-85568600 | Weak transcription | Brain Anterior Caudate | brain |
| 12 | chr4:85539200-85560200 | Weak transcription | Left Ventricle | heart |
| 13 | chr4:85540000-85562000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 14 | chr4:85540800-85558000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 15 | chr4:85541000-85557800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 16 | chr4:85541000-85561800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 17 | chr4:85544200-85561600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 18 | chr4:85544600-85560200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 19 | chr4:85544600-85564400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 20 | chr4:85544600-85568000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 21 | chr4:85544600-85572400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 22 | chr4:85545200-85576400 | Weak transcription | Esophagus | oesophagus |
| 23 | chr4:85546600-85570400 | Weak transcription | Small Intestine | intestine |
| 24 | chr4:85547000-85562400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 25 | chr4:85548200-85558200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 26 | chr4:85554200-85562000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 27 | chr4:85555200-85568800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 28 | chr4:85556000-85560200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 29 | chr4:85556200-85559400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 30 | chr4:85556600-85557200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr4:85556600-85557400 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 32 | chr4:85556600-85560200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 33 | chr4:85556600-85570400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 34 | chr4:85556600-85572200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 35 | chr4:85556800-85557200 | Weak transcription | HMEC | breast |
| 36 | chr4:85556800-85557400 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 37 | chr4:85556800-85558800 | Strong transcription | Fetal Intestine Small | intestine |
| 38 | chr4:85556800-85559000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 39 | chr4:85556800-85570600 | Weak transcription | Lung | lung |
| 40 | chr4:85556800-85570600 | Weak transcription | NHEK | skin |
| 41 | chr4:85557000-85559000 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 42 | chr4:85557000-85559400 | Strong transcription | Fetal Intestine Large | intestine |
