Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:102975291..102976986-chr8:102979593..102982495,2	MCF-7	breast:
2	chr8:102981952..102984209-chr8:102995225..102997450,2	MCF-7	breast:
3	chr8:102968161..102969952-chr8:102981485..102983246,2	MCF-7	breast:
4	chr8:102658241..102659115-chr8:102982184..102983000,3	MCF-7	breast:
5	chr8:102979732..102981930-chr8:102982441..102985992,3	K562	blood:

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10429306	1.00[EUR][1000 genomes]
rs10505013	1.00[MEX][hapmap]
rs11996181	1.00[EUR][1000 genomes]
rs12114203	1.00[EUR][1000 genomes]
rs6998151	1.00[MEX][hapmap]
rs73279256	1.00[AMR][1000 genomes]
rs73279295	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73279297	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73279300	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73279301	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73281304	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73281308	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73293347	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7820619	1.00[MEX][hapmap]
rs7843596	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs9969490	1.00[EUR][1000 genomes]
rs9969492	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018653	chr8:102818271-103009082	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv539700	chr8:102818271-103009082	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv831411	chr8:102937991-103108140	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102965400-102989800	Weak transcription	Stomach Smooth Muscle	stomach
2	chr8:102976000-102992000	Weak transcription	Right Ventricle	heart
3	chr8:102979400-102985600	Enhancers	Fetal Muscle Leg	muscle
4	chr8:102980000-102987200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr8:102980200-102983200	Weak transcription	Left Ventricle	heart
6	chr8:102980200-102983200	Weak transcription	Rectal Smooth Muscle	rectum
7	chr8:102980200-102988200	Weak transcription	Spleen	Spleen
8	chr8:102980800-102985400	Weak transcription	Fetal Heart	heart
9	chr8:102981000-102984200	Weak transcription	Ovary	ovary
10	chr8:102981000-102987400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr8:102981000-102992000	Weak transcription	Esophagus	oesophagus
12	chr8:102981400-102982600	Weak transcription	Fetal Brain Male	brain
13	chr8:102981400-102983200	Weak transcription	Psoas Muscle	Psoas
14	chr8:102981400-102985000	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr8:102981400-102989800	Weak transcription	Aorta	Aorta
16	chr8:102981600-102983000	Weak transcription	Fetal Brain Female	brain
17	chr8:102981600-102983000	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr8:102982200-102983000	Enhancers	GM12878-XiMat	blood
19	chr8:102982400-102983000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr8:102982400-102983400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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