Variant report

Variant	rs12119649
Chromosome Location	chr1:179608560-179608561
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1060775	1.00[CEU][hapmap]
rs10798689	1.00[CEU][hapmap]
rs12134954	1.00[CEU][hapmap]
rs12565481	1.00[YRI][hapmap]
rs1410590	1.00[CEU][hapmap]
rs7518557	1.00[CEU][hapmap]
rs928016	1.00[CEU][hapmap]
rs963062	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013000	chr1:179589193-179628536	Enhancers Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
2	esv3394963	chr1:179605329-179609927	Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	esv3445853	chr1:179606354-179609202	Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
4	nsv511720	chr1:179606860-179608694	Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
5	esv1819489	chr1:179607382-179608970	Inactive region	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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