The 2.0 version of rSNPBase

Variant report

Variant rs12128050
Chromosome Location chr1:151617121-151617122
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151586400-151622200 Weak transcription Fetal Thymus thymus
2 chr1:151586400-151626600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:151587600-151640600 Weak transcription Fetal Brain Male brain
4 chr1:151588000-151626600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:151588200-151620600 Weak transcription Brain Germinal Matrix brain
6 chr1:151588200-151665200 Weak transcription Aorta Aorta
7 chr1:151589000-151617600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:151589000-151620600 Weak transcription Primary B cells from peripheral blood blood
9 chr1:151591000-151630800 Weak transcription Fetal Kidney kidney
10 chr1:151591200-151675400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:151592000-151622600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr1:151592600-151633800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:151592800-151630600 Weak transcription Hela-S3 cervix
14 chr1:151594000-151621000 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:151594000-151652800 Weak transcription Right Ventricle heart
16 chr1:151594200-151617400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:151594200-151620600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr1:151601200-151617800 Weak transcription Fetal Brain Female brain
19 chr1:151601400-151629800 Weak transcription Thymus Thymus
20 chr1:151603000-151663200 Weak transcription Colonic Mucosa Colon
21 chr1:151606000-151621800 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr1:151606800-151630800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:151608200-151630600 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr1:151610200-151633800 Weak transcription HUVEC blood vessel
25 chr1:151610400-151626800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:151610600-151617800 Weak transcription Fetal Muscle Leg muscle
27 chr1:151610600-151618000 Weak transcription Ovary ovary
28 chr1:151610600-151620600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:151610600-151620600 Weak transcription Fetal Stomach stomach
30 chr1:151610600-151625800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr1:151610600-151626000 Weak transcription Spleen Spleen
32 chr1:151610600-151626600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr1:151610600-151630600 Weak transcription Fetal Muscle Trunk muscle
34 chr1:151610600-151631000 Weak transcription Stomach Smooth Muscle stomach
35 chr1:151610600-151652200 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:151610600-151665000 Weak transcription Lung lung
37 chr1:151610800-151620600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr1:151610800-151631000 Weak transcription Placenta Amnion Placenta Amnion
39 chr1:151611000-151625800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:151611200-151619200 Weak transcription Fetal Lung lung
41 chr1:151611400-151630400 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr1:151611400-151630400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr1:151611400-151631000 Weak transcription Brain Anterior Caudate brain
44 chr1:151611600-151626600 Weak transcription Brain Inferior Temporal Lobe brain
45 chr1:151611600-151628000 Weak transcription Brain Substantia Nigra brain
46 chr1:151611600-151633000 Weak transcription Brain Hippocampus Middle brain
47 chr1:151611600-151634200 Weak transcription Psoas Muscle Psoas
48 chr1:151611600-151637600 Weak transcription Fetal Heart heart
49 chr1:151611600-151639800 Weak transcription K562 blood
50 chr1:151611600-151640600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015