The 2.0 version of rSNPBase

Variant report

Variant rs12135290
Chromosome Location chr1:95397882-95397883
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95393400-95401800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr1:95393600-95404000 Weak transcription Primary hematopoietic stem cells blood
3 chr1:95394000-95415600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:95395400-95399200 Weak transcription Brain Germinal Matrix brain
5 chr1:95395400-95400200 Weak transcription HUVEC blood vessel
6 chr1:95395400-95400600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:95395400-95400600 Weak transcription A549 lung
8 chr1:95395400-95400600 Weak transcription Osteobl bone
9 chr1:95395400-95400800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:95395400-95401800 Weak transcription Brain Anterior Caudate brain
11 chr1:95395400-95404000 Weak transcription Brain Angular Gyrus brain
12 chr1:95395400-95410400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr1:95395600-95398000 Weak transcription Fetal Stomach stomach
14 chr1:95395600-95398600 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr1:95395600-95398600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:95395600-95398600 Weak transcription Adipose Nuclei Adipose
17 chr1:95395600-95398600 Weak transcription Aorta Aorta
18 chr1:95395600-95398600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:95395600-95398800 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:95395600-95398800 Weak transcription Left Ventricle heart
21 chr1:95395600-95400400 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr1:95395600-95400400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:95395600-95400400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:95395600-95400600 Weak transcription H1 Cell Line embryonic stem cell
25 chr1:95395600-95400600 Weak transcription NH-A brain
26 chr1:95395600-95400800 Weak transcription Brain Substantia Nigra brain
27 chr1:95395600-95400800 Weak transcription Fetal Kidney kidney
28 chr1:95395600-95401200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr1:95395600-95401400 Weak transcription H9 Cell Line embryonic stem cell
30 chr1:95395600-95401400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:95395600-95401400 Weak transcription Placenta Amnion Placenta Amnion
32 chr1:95395600-95401800 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:95395600-95401800 Weak transcription Colon Smooth Muscle Colon
34 chr1:95395600-95401800 Weak transcription Lung lung
35 chr1:95395600-95401800 Weak transcription Rectal Smooth Muscle rectum
36 chr1:95395600-95401800 Weak transcription NHLF lung
37 chr1:95395600-95402000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:95395600-95403400 Weak transcription Right Atrium heart
39 chr1:95395600-95403800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:95395600-95403800 Weak transcription Gastric stomach
41 chr1:95395600-95403800 Weak transcription Right Ventricle heart
42 chr1:95395600-95404200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:95395600-95407000 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:95395600-95412400 Weak transcription Colonic Mucosa Colon
45 chr1:95395600-95412400 Weak transcription Pancreas Pancrea
46 chr1:95395600-95416400 Weak transcription Brain Hippocampus Middle brain
47 chr1:95395800-95398600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:95395800-95400200 Weak transcription Muscle Satellite Cultured Cells --
49 chr1:95395800-95401400 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr1:95395800-95401800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015