The 2.0 version of rSNPBase

Variant report

Variant rs61772605
Chromosome Location chr1:95399329-95399330
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95393400-95401800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr1:95393600-95404000 Weak transcription Primary hematopoietic stem cells blood
3 chr1:95394000-95415600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:95395400-95400200 Weak transcription HUVEC blood vessel
5 chr1:95395400-95400600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:95395400-95400600 Weak transcription A549 lung
7 chr1:95395400-95400600 Weak transcription Osteobl bone
8 chr1:95395400-95400800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:95395400-95401800 Weak transcription Brain Anterior Caudate brain
10 chr1:95395400-95404000 Weak transcription Brain Angular Gyrus brain
11 chr1:95395400-95410400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:95395600-95400400 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr1:95395600-95400400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:95395600-95400400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:95395600-95400600 Weak transcription H1 Cell Line embryonic stem cell
16 chr1:95395600-95400600 Weak transcription NH-A brain
17 chr1:95395600-95400800 Weak transcription Brain Substantia Nigra brain
18 chr1:95395600-95400800 Weak transcription Fetal Kidney kidney
19 chr1:95395600-95401200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:95395600-95401400 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:95395600-95401400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:95395600-95401400 Weak transcription Placenta Amnion Placenta Amnion
23 chr1:95395600-95401800 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:95395600-95401800 Weak transcription Colon Smooth Muscle Colon
25 chr1:95395600-95401800 Weak transcription Lung lung
26 chr1:95395600-95401800 Weak transcription Rectal Smooth Muscle rectum
27 chr1:95395600-95401800 Weak transcription NHLF lung
28 chr1:95395600-95402000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:95395600-95403400 Weak transcription Right Atrium heart
30 chr1:95395600-95403800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:95395600-95403800 Weak transcription Gastric stomach
32 chr1:95395600-95403800 Weak transcription Right Ventricle heart
33 chr1:95395600-95404200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr1:95395600-95407000 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:95395600-95412400 Weak transcription Colonic Mucosa Colon
36 chr1:95395600-95412400 Weak transcription Pancreas Pancrea
37 chr1:95395600-95416400 Weak transcription Brain Hippocampus Middle brain
38 chr1:95395800-95400200 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:95395800-95401400 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr1:95395800-95401800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:95395800-95408600 Weak transcription Brain Cingulate Gyrus brain
42 chr1:95396000-95401200 Weak transcription Fetal Heart heart
43 chr1:95396000-95403200 Weak transcription Small Intestine intestine
44 chr1:95396000-95407800 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:95396200-95400600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr1:95396200-95401800 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr1:95396200-95401800 Weak transcription Fetal Lung lung
48 chr1:95396400-95400200 Strong transcription HSMM muscle
49 chr1:95396600-95401200 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr1:95396800-95400400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015