Variant report

Variant rs12153
Chromosome Location chr8:8560909-8560910
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:8558400-8562800 Active TSS Rectal Mucosa Donor 29 rectum
2 chr8:8559200-8562000 Bivalent/Poised TSS Fetal Stomach stomach
3 chr8:8559400-8561400 Bivalent Enhancer Fetal Brain Male brain
4 chr8:8559600-8561000 Flanking Active TSS Colonic Mucosa Colon
5 chr8:8560000-8561000 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
6 chr8:8560000-8561000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
7 chr8:8560000-8561200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
8 chr8:8560000-8561200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr8:8560000-8561200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
10 chr8:8560000-8561600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr8:8560000-8562000 Weak transcription Fetal Lung lung
12 chr8:8560000-8562600 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr8:8560000-8563600 Enhancers GM12878-XiMat blood
14 chr8:8560000-8563600 Weak transcription Hela-S3 cervix
15 chr8:8560200-8561000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr8:8560200-8561000 Enhancers Placenta Placenta
17 chr8:8560200-8561000 Active TSS Rectal Smooth Muscle rectum
18 chr8:8560200-8562000 Weak transcription H9 Cell Line embryonic stem cell
19 chr8:8560200-8562200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr8:8560200-8562600 Weak transcription NHLF lung
21 chr8:8560400-8561000 Bivalent Enhancer H1 Cell Line embryonic stem cell
22 chr8:8560400-8561000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
23 chr8:8560400-8561000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
24 chr8:8560400-8561000 Enhancers Sigmoid Colon Sigmoid Colon
25 chr8:8560400-8561000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
26 chr8:8560400-8561200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr8:8560400-8561400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
28 chr8:8560400-8561800 Bivalent Enhancer Fetal Intestine Large intestine
29 chr8:8560400-8562000 Enhancers Adipose Nuclei Adipose
30 chr8:8560400-8562200 Active TSS Duodenum Mucosa Duodenum
31 chr8:8560400-8563000 ZNF genes & repeats Fetal Intestine Small intestine
32 chr8:8560400-8564400 Weak transcription Placenta Amnion Placenta Amnion
33 chr8:8560600-8561000 Enhancers Pancreas Pancrea
34 chr8:8560600-8561000 Enhancers Small Intestine intestine
35 chr8:8560600-8562000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr8:8560600-8562600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr8:8560800-8561000 Enhancers ES-WA7 Cell Line embryonic stem cell
38 chr8:8560800-8561000 Flanking Active TSS Stomach Mucosa stomach
39 chr8:8560800-8561800 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr8:8560800-8562200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr8:8560800-8562200 Enhancers Liver Liver
42 chr8:8560800-8562400 Active TSS Gastric stomach
43 chr8:8560800-8562600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr8:8560800-8563000 Enhancers Cortex derived primary cultured neurospheres brain
45 chr8:8560800-8563600 Weak transcription Esophagus oesophagus

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