Variant report

Variant rs12680167
Chromosome Location chr8:8562467-8562468
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:8558400-8562800 Active TSS Rectal Mucosa Donor 29 rectum
2 chr8:8560000-8562600 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr8:8560000-8563600 Enhancers GM12878-XiMat blood
4 chr8:8560000-8563600 Weak transcription Hela-S3 cervix
5 chr8:8560200-8562600 Weak transcription NHLF lung
6 chr8:8560400-8563000 ZNF genes & repeats Fetal Intestine Small intestine
7 chr8:8560400-8564400 Weak transcription Placenta Amnion Placenta Amnion
8 chr8:8560600-8562600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr8:8560800-8562600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr8:8560800-8563000 Enhancers Cortex derived primary cultured neurospheres brain
11 chr8:8560800-8563600 Weak transcription Esophagus oesophagus
12 chr8:8561000-8562800 Enhancers H1 Cell Line embryonic stem cell
13 chr8:8561000-8562800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr8:8561000-8563400 Weak transcription Placenta Placenta
15 chr8:8561000-8563800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr8:8561200-8562800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr8:8561200-8562800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr8:8561600-8562600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
19 chr8:8561800-8562600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr8:8561800-8562600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr8:8561800-8562600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
22 chr8:8561800-8562600 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
23 chr8:8561800-8562800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
24 chr8:8561800-8562800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
25 chr8:8562000-8562600 Enhancers ES-WA7 Cell Line embryonic stem cell
26 chr8:8562000-8562600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
27 chr8:8562000-8562600 Enhancers Skeletal Muscle Female skeletal muscle
28 chr8:8562000-8562800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
29 chr8:8562200-8562600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr8:8562200-8562600 Active TSS HUES64 Cell Line embryonic stem cell
31 chr8:8562200-8562600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr8:8562200-8562600 Enhancers Stomach Mucosa stomach
33 chr8:8562200-8562800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr8:8562200-8563400 Weak transcription Liver Liver
35 chr8:8562200-8563400 Weak transcription Duodenum Mucosa Duodenum
36 chr8:8562400-8562600 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
37 chr8:8562400-8562600 Flanking Active TSS H9 Cell Line embryonic stem cell
38 chr8:8562400-8562600 Bivalent Enhancer Fetal Brain Female brain
39 chr8:8562400-8563400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr8:8562400-8563600 Weak transcription Gastric stomach

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