Variant report
Variant | rs12167060 |
---|---|
Chromosome Location | chr22:29537065-29537066 |
allele | C/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:29483400-29550200 | Weak transcription | Rectal Smooth Muscle | rectum |
2 | chr22:29490400-29539800 | Weak transcription | Psoas Muscle | Psoas |
3 | chr22:29508200-29537200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
4 | chr22:29517200-29546200 | Strong transcription | Dnd41 | blood |
5 | chr22:29522400-29541600 | Weak transcription | HMEC | breast |
6 | chr22:29522600-29538000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
7 | chr22:29523400-29548200 | Weak transcription | Stomach Mucosa | stomach |
8 | chr22:29525800-29544400 | Weak transcription | NHLF | lung |
9 | chr22:29526200-29542800 | Weak transcription | Fetal Heart | heart |
10 | chr22:29526200-29547000 | Weak transcription | K562 | blood |
11 | chr22:29527600-29548000 | Strong transcription | Fetal Intestine Small | intestine |
12 | chr22:29528000-29539000 | Strong transcription | Ovary | ovary |
13 | chr22:29528600-29544400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
14 | chr22:29529400-29547000 | Strong transcription | Thymus | Thymus |
15 | chr22:29530000-29541400 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
16 | chr22:29530800-29546800 | Genic enhancers | Fetal Muscle Leg | muscle |
17 | chr22:29531000-29540800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
18 | chr22:29531000-29541000 | Strong transcription | Stomach Smooth Muscle | stomach |
19 | chr22:29531200-29539000 | Strong transcription | Esophagus | oesophagus |
20 | chr22:29531600-29542800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
21 | chr22:29531600-29548400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
22 | chr22:29532600-29538600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
23 | chr22:29532800-29538600 | Strong transcription | Left Ventricle | heart |
24 | chr22:29533000-29538000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
25 | chr22:29533000-29543200 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
26 | chr22:29533000-29545600 | Strong transcription | Fetal Intestine Large | intestine |
27 | chr22:29533200-29543200 | Strong transcription | Fetal Stomach | stomach |
28 | chr22:29533400-29538400 | Strong transcription | Colonic Mucosa | Colon |
29 | chr22:29533400-29538800 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
30 | chr22:29533400-29539400 | Strong transcription | Brain Anterior Caudate | brain |
31 | chr22:29533600-29538000 | Weak transcription | Colon Smooth Muscle | Colon |
32 | chr22:29533600-29538400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
33 | chr22:29533600-29542400 | Strong transcription | Duodenum Mucosa | Duodenum |
34 | chr22:29533800-29538000 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
35 | chr22:29533800-29539800 | Strong transcription | Brain Germinal Matrix | brain |
36 | chr22:29533800-29543600 | Strong transcription | Fetal Brain Female | brain |
37 | chr22:29534600-29540600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
38 | chr22:29534800-29537200 | Weak transcription | Right Ventricle | heart |
39 | chr22:29534800-29537400 | Weak transcription | Pancreas | Pancrea |
40 | chr22:29534800-29538000 | Weak transcription | NHDF-Ad | bronchial |
41 | chr22:29534800-29540400 | Weak transcription | Gastric | stomach |
42 | chr22:29534800-29545600 | Weak transcription | Aorta | Aorta |
43 | chr22:29535400-29540600 | Weak transcription | NHEK | skin |
44 | chr22:29535600-29537400 | Genic enhancers | Fetal Lung | lung |
45 | chr22:29535600-29537400 | Enhancers | HepG2 | liver |
46 | chr22:29535600-29539400 | Genic enhancers | Skeletal Muscle Female | skeletal muscle |
47 | chr22:29535800-29537200 | Strong transcription | Fetal Brain Male | brain |
48 | chr22:29535800-29538200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
49 | chr22:29535800-29538600 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
50 | chr22:29535800-29538600 | Strong transcription | Lung | lung |