Variant report
| Variant | rs2007772 |
|---|---|
| Chromosome Location | chr22:29523559-29523560 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:29483400-29550200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 2 | chr22:29490400-29539800 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr22:29493200-29536400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr22:29505800-29533000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 5 | chr22:29508200-29537200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 6 | chr22:29509400-29524400 | Weak transcription | NHDF-Ad | bronchial |
| 7 | chr22:29509400-29525000 | Weak transcription | Osteobl | bone |
| 8 | chr22:29510000-29525400 | Weak transcription | Brain Anterior Caudate | brain |
| 9 | chr22:29510000-29528200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 10 | chr22:29510000-29530800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 11 | chr22:29510000-29531000 | Weak transcription | Brain Hippocampus Middle | brain |
| 12 | chr22:29510200-29531000 | Weak transcription | Brain Substantia Nigra | brain |
| 13 | chr22:29512600-29533000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr22:29514400-29532800 | Weak transcription | Gastric | stomach |
| 15 | chr22:29515000-29533000 | Weak transcription | Colon Smooth Muscle | Colon |
| 16 | chr22:29515600-29533800 | Weak transcription | Brain Germinal Matrix | brain |
| 17 | chr22:29516600-29531000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 18 | chr22:29516800-29530800 | Weak transcription | Aorta | Aorta |
| 19 | chr22:29517200-29546200 | Strong transcription | Dnd41 | blood |
| 20 | chr22:29518400-29535800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr22:29519400-29528200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 22 | chr22:29519400-29533800 | Weak transcription | Fetal Brain Female | brain |
| 23 | chr22:29520000-29526800 | Strong transcription | Fetal Stomach | stomach |
| 24 | chr22:29520000-29528400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 25 | chr22:29520200-29523800 | Strong transcription | Thymus | Thymus |
| 26 | chr22:29520600-29534200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 27 | chr22:29520800-29525000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 28 | chr22:29521000-29523600 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 29 | chr22:29521000-29524600 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 30 | chr22:29521400-29525000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 31 | chr22:29521400-29526800 | Strong transcription | Ovary | ovary |
| 32 | chr22:29521400-29530600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 33 | chr22:29521400-29533400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 34 | chr22:29521600-29524200 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 35 | chr22:29521600-29525000 | Weak transcription | Lung | lung |
| 36 | chr22:29521800-29523800 | Strong transcription | Placenta | Placenta |
| 37 | chr22:29522000-29533400 | Weak transcription | Colonic Mucosa | Colon |
| 38 | chr22:29522200-29525000 | Weak transcription | Esophagus | oesophagus |
| 39 | chr22:29522200-29526400 | Enhancers | Liver | Liver |
| 40 | chr22:29522400-29523800 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 41 | chr22:29522400-29524000 | Enhancers | Fetal Kidney | kidney |
| 42 | chr22:29522400-29525000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 43 | chr22:29522400-29541600 | Weak transcription | HMEC | breast |
| 44 | chr22:29522600-29523600 | Enhancers | Fetal Intestine Large | intestine |
| 45 | chr22:29522600-29524400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 46 | chr22:29522600-29525000 | Weak transcription | Left Ventricle | heart |
| 47 | chr22:29522600-29525000 | Weak transcription | K562 | blood |
| 48 | chr22:29522600-29525200 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 49 | chr22:29522600-29530800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 50 | chr22:29522600-29531000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
