Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10132373	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10135213	0.92[EUR][1000 genomes]
rs10138200	0.92[EUR][1000 genomes]
rs10148827	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10151563	0.92[EUR][1000 genomes]
rs1041088	0.92[EUR][1000 genomes]
rs10872849	0.83[EUR][1000 genomes]
rs11156660	0.84[EUR][1000 genomes]
rs11156661	0.84[EUR][1000 genomes]
rs11626839	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12434266	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12588620	0.83[EUR][1000 genomes]
rs12889162	0.92[EUR][1000 genomes]
rs2378848	0.83[EUR][1000 genomes]
rs4981828	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs5024655	0.92[EUR][1000 genomes]
rs61995523	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6571402	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6571403	0.92[EUR][1000 genomes]
rs6571404	0.92[EUR][1000 genomes]
rs7146274	0.83[EUR][1000 genomes]
rs7147686	0.83[EUR][1000 genomes]
rs7156178	0.84[EUR][1000 genomes]
rs7494025	0.92[EUR][1000 genomes]
rs8022573	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9788563	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901587	chr14:31501505-31752664	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	nsv1050054	chr14:31501703-31733642	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
3	esv2830427	chr14:31639110-32000034	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31699600-31707600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr14:31701800-31708600	Weak transcription	K562	blood
3	chr14:31703000-31710200	Weak transcription	Fetal Heart	heart
4	chr14:31703800-31706400	Weak transcription	HepG2	liver
5	chr14:31705600-31707400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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