Variant report

Variant	rs12195669
Chromosome Location	chr6:143841816-143841817
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10457748	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11155298	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12524240	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1542622	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1971260	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35991219	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6920034	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7745861	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7747351	0.85[ASN][1000 genomes]
rs9386031	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143833200-143849600	Weak transcription	Primary T cells from cord blood	blood
2	chr6:143833400-143849400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr6:143834600-143855800	Weak transcription	Duodenum Mucosa	Duodenum
4	chr6:143835000-143850000	Weak transcription	Fetal Intestine Large	intestine
5	chr6:143836800-143848400	Weak transcription	Brain Cingulate Gyrus	brain
6	chr6:143838800-143842800	Weak transcription	Stomach Mucosa	stomach
7	chr6:143841000-143842600	Weak transcription	Fetal Heart	heart
8	chr6:143841600-143842600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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