Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:150858643..150861809-chr6:150864654..150868383,3	K562	blood:

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12190552	0.81[AMR][1000 genomes]
rs12195563	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12197420	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12205882	0.81[AMR][1000 genomes]
rs12210903	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13208542	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13213713	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4321833	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4321834	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4457168	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4467791	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4580880	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020067	chr6:150730783-150870708	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv886772	chr6:150743364-151024280	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv464079	chr6:150836676-150873766	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv604850	chr6:150836676-150873766	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150857000-150862400	Weak transcription	Fetal Lung	lung
2	chr6:150857600-150860200	Weak transcription	Liver	Liver
3	chr6:150857600-150862400	Weak transcription	HepG2	liver
4	chr6:150858000-150860200	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr6:150858000-150864000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr6:150858000-150864200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr6:150858200-150860000	Enhancers	Stomach Smooth Muscle	stomach
8	chr6:150858600-150860000	Enhancers	Left Ventricle	heart
9	chr6:150858800-150859800	Enhancers	Brain Anterior Caudate	brain
10	chr6:150858800-150859800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
11	chr6:150859000-150859800	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr6:150859000-150862800	Weak transcription	Right Atrium	heart
13	chr6:150859000-150865400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr6:150859200-150859800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr6:150859200-150860400	ZNF genes & repeats	Fetal Muscle Leg	muscle
16	chr6:150859200-150860600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr6:150859400-150860400	Weak transcription	Rectal Smooth Muscle	rectum
18	chr6:150859400-150860600	Weak transcription	Lung	lung
19	chr6:150859400-150862400	Weak transcription	Colon Smooth Muscle	Colon
20	chr6:150859400-150867400	Weak transcription	Fetal Kidney	kidney

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