Variant report

Variant rs12201961
Chromosome Location chr6:149546657-149546658
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149533200-149549400 Weak transcription Brain Inferior Temporal Lobe brain
2 chr6:149534200-149547600 Weak transcription Primary T cells from cord blood blood
3 chr6:149534800-149548600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:149535000-149546800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr6:149538200-149548600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr6:149540400-149551600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr6:149540600-149547200 Weak transcription Brain Substantia Nigra brain
8 chr6:149542200-149560600 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr6:149543200-149547000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr6:149543800-149547400 Enhancers Liver Liver
11 chr6:149544200-149547600 Enhancers Cortex derived primary cultured neurospheres brain
12 chr6:149544200-149548000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr6:149544400-149547400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr6:149544400-149547600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr6:149544400-149549600 Enhancers Fetal Lung lung
16 chr6:149544600-149547200 Enhancers Brain Germinal Matrix brain
17 chr6:149544600-149547600 Enhancers Fetal Brain Male brain
18 chr6:149544600-149548000 Enhancers Adipose Nuclei Adipose
19 chr6:149544800-149547000 Weak transcription Brain Anterior Caudate brain
20 chr6:149545000-149547200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr6:149545400-149550400 Weak transcription Right Ventricle heart
22 chr6:149545400-149553000 Weak transcription Rectal Smooth Muscle rectum
23 chr6:149545600-149546800 Enhancers Rectal Mucosa Donor 31 rectum
24 chr6:149545600-149549600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr6:149545800-149547200 Weak transcription Fetal Kidney kidney
26 chr6:149545800-149548600 Weak transcription Fetal Stomach stomach
27 chr6:149545800-149549400 Weak transcription HSMM muscle
28 chr6:149545800-149551600 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr6:149545800-149553000 Weak transcription Muscle Satellite Cultured Cells --
30 chr6:149545800-149557800 Weak transcription Colon Smooth Muscle Colon
31 chr6:149545800-149560200 Weak transcription Right Atrium heart
32 chr6:149546000-149551600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr6:149546200-149549000 Weak transcription Fetal Heart heart
34 chr6:149546400-149548800 Weak transcription Fetal Brain Female brain
35 chr6:149546600-149546800 Enhancers Fetal Muscle Leg muscle
36 chr6:149546600-149547200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:149546600-149547400 Enhancers Brain Cingulate Gyrus brain
38 chr6:149546600-149547600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr6:149546600-149547600 Enhancers Placenta Placenta
40 chr6:149546600-149547600 Enhancers Ovary ovary
41 chr6:149546600-149548000 Enhancers Brain Hippocampus Middle brain

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