Variant report

Variant	rs12208210
Chromosome Location	chr6:82305109-82305110
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11755003	0.89[CEU][hapmap];0.83[AMR][1000 genomes]
rs1322895	0.89[CEU][hapmap];0.81[AMR][1000 genomes]
rs16893227	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs16893251	0.81[AMR][1000 genomes]
rs16893263	0.81[AMR][1000 genomes]
rs16893274	0.81[AMR][1000 genomes]
rs16893284	0.89[CEU][hapmap];0.82[MEX][hapmap];0.81[TSI][hapmap]
rs57460191	0.81[AMR][1000 genomes]
rs60222447	0.87[AMR][1000 genomes]
rs6935163	0.83[AMR][1000 genomes]
rs73472562	0.88[AMR][1000 genomes]
rs73474693	0.81[AMR][1000 genomes]
rs73476713	0.81[AMR][1000 genomes]
rs73750607	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv604087	chr6:81792413-82326091	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82304800-82305800	Enhancers	Placenta	Placenta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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