Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:69460973..69463599-chr6:69463618..69467509,4	K562	blood:

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10945133	1.00[CHB][hapmap];1.00[LWK][hapmap]
rs12198214	1.00[CHB][hapmap]
rs12210824	1.00[CHB][hapmap]
rs17198341	0.81[CEU][hapmap];1.00[CHB][hapmap];0.86[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs7754547	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886130	chr6:68950298-69531957	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69463400-69470800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr6:69464000-69469000	Enhancers	Brain Substantia Nigra	brain
3	chr6:69464600-69468000	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr6:69464800-69468400	Enhancers	Fetal Lung	lung
5	chr6:69465200-69468200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:69465400-69468000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:69465400-69468600	Enhancers	Brain Angular Gyrus	brain
8	chr6:69465600-69467400	Enhancers	Primary hematopoietic stem cells	blood
9	chr6:69465600-69467400	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr6:69465800-69466800	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr6:69466000-69467400	Enhancers	Fetal Brain Female	brain
12	chr6:69466200-69466800	Weak transcription	Adipose Nuclei	Adipose
13	chr6:69466200-69467200	Enhancers	Brain Hippocampus Middle	brain
14	chr6:69466200-69467200	Weak transcription	Fetal Stomach	stomach
15	chr6:69466400-69467000	Enhancers	Brain Anterior Caudate	brain
16	chr6:69466400-69467000	Enhancers	Brain Inferior Temporal Lobe	brain
17	chr6:69466400-69467200	Enhancers	Fetal Brain Male	brain
18	chr6:69466400-69467200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
19	chr6:69466600-69467000	Enhancers	Brain Cingulate Gyrus	brain
20	chr6:69466600-69467000	Enhancers	Brain Germinal Matrix	brain
21	chr6:69466600-69467200	Enhancers	K562	blood

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