Variant report

Variant	rs12218780
Chromosome Location	chr10:119238200-119238201
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11198004	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11198007	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11198009	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17096290	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2478970	1.00[EUR][1000 genomes]
rs7089745	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7089767	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119235200-119238200	Enhancers	Colon Smooth Muscle	Colon
2	chr10:119235600-119238200	Enhancers	Rectal Smooth Muscle	rectum
3	chr10:119235800-119238400	Enhancers	Osteobl	bone
4	chr10:119236600-119238400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr10:119236800-119238400	Enhancers	HSMMtube	muscle
6	chr10:119236800-119238600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr10:119236800-119238800	Enhancers	NHDF-Ad	bronchial
8	chr10:119237000-119238600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr10:119237200-119238200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr10:119237200-119238200	Enhancers	NHEK	skin
11	chr10:119237400-119238200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr10:119237600-119239800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr10:119237600-119248600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr10:119238000-119238400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr10:119238000-119238400	Bivalent Enhancer	Primary B cells from peripheral blood	blood
16	chr10:119238000-119238400	Enhancers	HMEC	breast
17	chr10:119238000-119240800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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