Variant report

Variant	rs12233433
Chromosome Location	chr3:56749086-56749087
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs13319627	0.86[AMR][1000 genomes]
rs3732511	0.86[AMR][1000 genomes]
rs41276471	0.86[AMR][1000 genomes]
rs4521191	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs55651418	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs56031438	0.83[AMR][1000 genomes]
rs56097266	0.82[AMR][1000 genomes]
rs56152533	0.91[AMR][1000 genomes]
rs6773569	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6777946	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6778753	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6780940	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6781979	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6781995	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6805864	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6808707	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7427683	0.86[AMR][1000 genomes]
rs7427684	0.86[AMR][1000 genomes]
rs7617179	0.86[AMR][1000 genomes]
rs7627227	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7650042	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9311618	0.86[AMR][1000 genomes]
rs9311619	0.86[AMR][1000 genomes]
rs9755927	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9757026	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9810507	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9816311	0.91[AMR][1000 genomes]
rs9826255	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9826362	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9826563	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9835767	0.91[AMR][1000 genomes]
rs9845925	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9855217	0.80[AMR][1000 genomes]
rs9856297	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9864273	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9864804	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9865146	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9866237	0.82[AMR][1000 genomes]
rs9882705	0.86[AMR][1000 genomes]
rs9883232	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56734800-56756400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr3:56739400-56758600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr3:56742200-56753000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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