The 2.0 version of rSNPBase

Variant report

Variant rs12243323
Chromosome Location chr10:25155625-25155626
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:25137600-25158400 Weak transcription Ovary ovary
2 chr10:25139800-25155800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr10:25147400-25156000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr10:25148200-25158400 Weak transcription HSMM muscle
5 chr10:25152200-25156200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr10:25153000-25160200 Weak transcription Fetal Stomach stomach
7 chr10:25153000-25161200 Weak transcription Fetal Muscle Leg muscle
8 chr10:25153000-25162400 Weak transcription Fetal Intestine Small intestine
9 chr10:25153400-25156000 Enhancers Brain Angular Gyrus brain
10 chr10:25153400-25156200 Enhancers NHLF lung
11 chr10:25153400-25156400 Enhancers NHEK skin
12 chr10:25153400-25156600 Enhancers HMEC breast
13 chr10:25153800-25156600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr10:25153800-25156600 Enhancers Hela-S3 cervix
15 chr10:25154000-25156000 Enhancers NH-A brain
16 chr10:25154000-25156400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr10:25154000-25156400 Enhancers HUVEC blood vessel
18 chr10:25154000-25156600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr10:25154000-25158600 Weak transcription Primary T cells fromperipheralblood blood
20 chr10:25154200-25155800 Enhancers Muscle Satellite Cultured Cells --
21 chr10:25154200-25155800 Enhancers Cortex derived primary cultured neurospheres brain
22 chr10:25154200-25156000 Enhancers Brain Hippocampus Middle brain
23 chr10:25154200-25156000 Enhancers K562 blood
24 chr10:25154200-25156000 Enhancers NHDF-Ad bronchial
25 chr10:25154200-25156000 Enhancers Osteobl bone
26 chr10:25154200-25156400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr10:25154400-25156000 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr10:25154400-25156600 Enhancers HUES64 Cell Line embryonic stem cell
29 chr10:25154400-25158800 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr10:25154600-25156000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr10:25154600-25156600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr10:25154600-25158400 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr10:25154600-25158600 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr10:25154600-25160000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr10:25154800-25156000 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr10:25154800-25156000 Weak transcription Fetal Brain Female brain
37 chr10:25154800-25156200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr10:25154800-25158400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr10:25154800-25160800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr10:25155000-25156000 Enhancers Brain Germinal Matrix brain
41 chr10:25155000-25156600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
42 chr10:25155200-25156000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr10:25155200-25156200 Enhancers Pancreatic Islets Pancreatic Islet
44 chr10:25155200-25156200 Weak transcription Fetal Lung lung
45 chr10:25155200-25161000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr10:25155400-25155800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr10:25155400-25155800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr10:25155400-25156000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr10:25155400-25156600 Enhancers HUES48 Cell Line embryonic stem cell
50 chr10:25155400-25156600 Enhancers iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015