The 2.0 version of rSNPBase

Variant report

Variant rs12248472
Chromosome Location chr10:28469504-28469505
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:28449800-28497000 Weak transcription Fetal Intestine Small intestine
2 chr10:28461400-28469600 Weak transcription Fetal Heart heart
3 chr10:28467200-28469800 Enhancers Fetal Lung lung
4 chr10:28467200-28470400 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr10:28467600-28469600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr10:28467600-28469600 Weak transcription HSMM muscle
7 chr10:28467600-28469600 Weak transcription HSMMtube muscle
8 chr10:28467600-28470600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr10:28467600-28472600 Weak transcription Fetal Stomach stomach
10 chr10:28467600-28485400 Weak transcription Primary monocytes fromperipheralblood blood
11 chr10:28467600-28491800 Weak transcription Psoas Muscle Psoas
12 chr10:28467600-28525600 Weak transcription Aorta Aorta
13 chr10:28467800-28470600 Weak transcription Osteobl bone
14 chr10:28467800-28471000 Enhancers Hela-S3 cervix
15 chr10:28467800-28495200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr10:28468200-28469600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr10:28468200-28469800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr10:28468200-28470400 Weak transcription Colon Smooth Muscle Colon
19 chr10:28468200-28470600 Weak transcription Stomach Smooth Muscle stomach
20 chr10:28468200-28471400 Weak transcription Rectal Smooth Muscle rectum
21 chr10:28468200-28484600 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr10:28468400-28469800 Enhancers Primary T helper cells PMA-I stimulated --
23 chr10:28468400-28469800 Enhancers Primary T helper cells fromperipheralblood blood
24 chr10:28468400-28470000 Enhancers Primary T cells from cord blood blood
25 chr10:28468600-28469600 Weak transcription Liver Liver
26 chr10:28468600-28470400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr10:28469000-28469800 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr10:28469000-28471400 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr10:28469200-28469800 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr10:28469400-28471200 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015