Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:45551775..45554609-chr10:45555349..45558284,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10047345	0.96[EUR][1000 genomes]
rs11239310	0.89[EUR][1000 genomes]
rs11239337	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs11494	0.89[EUR][1000 genomes]
rs12263839	0.84[AFR][1000 genomes]
rs12264627	0.89[EUR][1000 genomes]
rs17157327	0.87[EUR][1000 genomes]
rs17157328	0.87[EUR][1000 genomes]
rs2104898	0.87[EUR][1000 genomes]
rs41301613	0.84[EUR][1000 genomes]
rs4573635	0.89[EUR][1000 genomes]
rs56259997	0.89[EUR][1000 genomes]
rs57046651	0.89[EUR][1000 genomes]
rs59085162	0.89[EUR][1000 genomes]
rs60581169	0.89[EUR][1000 genomes]
rs61183370	0.85[EUR][1000 genomes]
rs61203275	0.84[AFR][1000 genomes]
rs6593454	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7080655	0.87[EUR][1000 genomes]
rs7095202	0.96[EUR][1000 genomes]
rs72782417	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73283471	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs74128177	0.87[AFR][1000 genomes]
rs7902918	0.88[CEU][hapmap];0.87[EUR][1000 genomes]
rs7915377	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7918953	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831846	chr10:45322236-45556370	Bivalent Enhancer Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv831848	chr10:45490176-45667670	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
3	nsv971917	chr10:45547355-45595482	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv2750897	chr10:45550145-45820136	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
5	nsv947902	chr10:45550636-45554818	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45549200-45554200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:45552000-45559600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr10:45552400-45552800	Enhancers	Monocytes-CD14+_RO01746	blood

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