Variant report

Variant	rs12262961
Chromosome Location	chr10:44420747-44420748
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11238684	1.00[AMR][1000 genomes]
rs11238690	1.00[AMR][1000 genomes]
rs11238693	1.00[AMR][1000 genomes]
rs11238694	1.00[AMR][1000 genomes]
rs11238696	1.00[AMR][1000 genomes]
rs11238697	1.00[AMR][1000 genomes]
rs11238698	1.00[AMR][1000 genomes]
rs11238708	1.00[AMR][1000 genomes]
rs11238714	1.00[AMR][1000 genomes]
rs11238758	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12240856	1.00[AMR][1000 genomes]
rs12245425	1.00[AMR][1000 genomes]
rs12248010	1.00[AMR][1000 genomes]
rs12248517	1.00[AMR][1000 genomes]
rs12250137	1.00[AMR][1000 genomes]
rs12259992	1.00[AMR][1000 genomes]
rs12263087	1.00[AMR][1000 genomes]
rs12264312	1.00[AMR][1000 genomes]
rs12265700	1.00[AMR][1000 genomes]
rs12267634	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051921	chr10:44378011-44458880	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44406800-44421800	Weak transcription	Fetal Heart	heart
2	chr10:44408200-44424000	Weak transcription	Right Ventricle	heart
3	chr10:44418200-44424000	Weak transcription	Left Ventricle	heart
4	chr10:44418600-44422600	Weak transcription	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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