The 2.0 version of rSNPBase

Variant report

Variant rs12274683
Chromosome Location chr11:18296730-18296731
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:18283600-18301600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr11:18285200-18303200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr11:18285400-18300600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr11:18285600-18308400 Weak transcription Gastric stomach
5 chr11:18285800-18298800 Weak transcription HSMMtube muscle
6 chr11:18287400-18303000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr11:18287600-18298600 Weak transcription Liver Liver
8 chr11:18287600-18299200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr11:18287600-18303000 Weak transcription Spleen Spleen
10 chr11:18287600-18334000 Weak transcription Right Atrium heart
11 chr11:18287800-18297000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr11:18287800-18298800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr11:18287800-18300800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr11:18287800-18301000 Weak transcription HSMM muscle
15 chr11:18289600-18299200 Weak transcription HMEC breast
16 chr11:18289800-18296800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr11:18290000-18296800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr11:18290000-18298800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr11:18290000-18299000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr11:18290000-18300200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr11:18290000-18300200 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr11:18290000-18300600 Weak transcription Primary T cells fromperipheralblood blood
23 chr11:18290000-18303200 Weak transcription NHEK skin
24 chr11:18290000-18303400 Weak transcription Small Intestine intestine
25 chr11:18290200-18299600 Weak transcription Primary B cells from peripheral blood blood
26 chr11:18290200-18300000 Weak transcription Duodenum Mucosa Duodenum
27 chr11:18290200-18300200 Weak transcription Adipose Nuclei Adipose
28 chr11:18290200-18300800 Weak transcription Hela-S3 cervix
29 chr11:18290200-18301200 Weak transcription H9 Cell Line embryonic stem cell
30 chr11:18290800-18298000 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr11:18291400-18303200 Weak transcription Brain Cingulate Gyrus brain
32 chr11:18291600-18298600 Weak transcription GM12878-XiMat blood
33 chr11:18291600-18301000 Weak transcription Stomach Smooth Muscle stomach
34 chr11:18291800-18303200 Weak transcription Brain Angular Gyrus brain
35 chr11:18291800-18307800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr11:18291800-18314400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr11:18292000-18300600 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr11:18292000-18303200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr11:18292000-18303600 Weak transcription Brain Germinal Matrix brain
40 chr11:18292000-18308400 Weak transcription Right Ventricle heart
41 chr11:18292000-18314800 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr11:18292400-18303200 Weak transcription Brain Inferior Temporal Lobe brain
43 chr11:18292400-18303200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr11:18292600-18300000 Weak transcription Left Ventricle heart
45 chr11:18292600-18300600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr11:18293200-18300800 Weak transcription HepG2 liver
47 chr11:18293600-18298800 Weak transcription Muscle Satellite Cultured Cells --
48 chr11:18293800-18303800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr11:18293800-18304200 Weak transcription Brain Substantia Nigra brain
50 chr11:18293800-18306200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015