The 2.0 version of rSNPBase

Variant report

Variant rs12802663
Chromosome Location chr11:18296595-18296596
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:18283600-18301600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr11:18285200-18303200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr11:18285400-18300600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr11:18285600-18308400 Weak transcription Gastric stomach
5 chr11:18285800-18298800 Weak transcription HSMMtube muscle
6 chr11:18287400-18303000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr11:18287600-18298600 Weak transcription Liver Liver
8 chr11:18287600-18299200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr11:18287600-18303000 Weak transcription Spleen Spleen
10 chr11:18287600-18334000 Weak transcription Right Atrium heart
11 chr11:18287800-18297000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr11:18287800-18298800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr11:18287800-18300800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr11:18287800-18301000 Weak transcription HSMM muscle
15 chr11:18289600-18296600 Weak transcription Fetal Stomach stomach
16 chr11:18289600-18299200 Weak transcription HMEC breast
17 chr11:18289800-18296800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr11:18290000-18296800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:18290000-18298800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr11:18290000-18299000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr11:18290000-18300200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr11:18290000-18300200 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr11:18290000-18300600 Weak transcription Primary T cells fromperipheralblood blood
24 chr11:18290000-18303200 Weak transcription NHEK skin
25 chr11:18290000-18303400 Weak transcription Small Intestine intestine
26 chr11:18290200-18299600 Weak transcription Primary B cells from peripheral blood blood
27 chr11:18290200-18300000 Weak transcription Duodenum Mucosa Duodenum
28 chr11:18290200-18300200 Weak transcription Adipose Nuclei Adipose
29 chr11:18290200-18300800 Weak transcription Hela-S3 cervix
30 chr11:18290200-18301200 Weak transcription H9 Cell Line embryonic stem cell
31 chr11:18290800-18298000 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr11:18291400-18303200 Weak transcription Brain Cingulate Gyrus brain
33 chr11:18291600-18298600 Weak transcription GM12878-XiMat blood
34 chr11:18291600-18301000 Weak transcription Stomach Smooth Muscle stomach
35 chr11:18291800-18303200 Weak transcription Brain Angular Gyrus brain
36 chr11:18291800-18307800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr11:18291800-18314400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr11:18292000-18300600 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr11:18292000-18303200 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr11:18292000-18303600 Weak transcription Brain Germinal Matrix brain
41 chr11:18292000-18308400 Weak transcription Right Ventricle heart
42 chr11:18292000-18314800 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr11:18292200-18296600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr11:18292400-18303200 Weak transcription Brain Inferior Temporal Lobe brain
45 chr11:18292400-18303200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr11:18292600-18300000 Weak transcription Left Ventricle heart
47 chr11:18292600-18300600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr11:18293200-18300800 Weak transcription HepG2 liver
49 chr11:18293600-18298800 Weak transcription Muscle Satellite Cultured Cells --
50 chr11:18293800-18303800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015