Variant report

Variant rs1227811
Chromosome Location chr19:37260787-37260788
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37234000-37262400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:37235000-37261200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr19:37235200-37261600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:37235200-37262200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
5 chr19:37235200-37262400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr19:37245600-37261600 ZNF genes & repeats Fetal Stomach stomach
7 chr19:37249200-37261800 Weak transcription HUVEC blood vessel
8 chr19:37250200-37262000 Weak transcription Stomach Mucosa stomach
9 chr19:37250400-37262000 Weak transcription Psoas Muscle Psoas
10 chr19:37252200-37261800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr19:37252800-37261800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr19:37253200-37261800 Weak transcription Colon Smooth Muscle Colon
13 chr19:37253400-37261800 Weak transcription Brain Cingulate Gyrus brain
14 chr19:37253400-37261800 Weak transcription Brain Hippocampus Middle brain
15 chr19:37253400-37261800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr19:37253800-37261800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr19:37253800-37261800 Weak transcription Muscle Satellite Cultured Cells --
18 chr19:37253800-37261800 Weak transcription Brain Angular Gyrus brain
19 chr19:37253800-37261800 Weak transcription HSMMtube muscle
20 chr19:37253800-37262400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr19:37254600-37262400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:37255200-37262200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
23 chr19:37255800-37262400 ZNF genes & repeats Fetal Intestine Small intestine
24 chr19:37256000-37261600 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr19:37256000-37261800 Weak transcription Gastric stomach
26 chr19:37256000-37262000 Weak transcription Aorta Aorta
27 chr19:37256200-37261000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr19:37256200-37261800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr19:37256200-37261800 Weak transcription Primary T cells from cord blood blood
30 chr19:37256200-37261800 Weak transcription Left Ventricle heart
31 chr19:37256400-37261800 Weak transcription Placenta Amnion Placenta Amnion
32 chr19:37256400-37261800 Weak transcription Stomach Smooth Muscle stomach
33 chr19:37256800-37261600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
34 chr19:37257200-37261800 ZNF genes & repeats Dnd41 blood
35 chr19:37257600-37261200 ZNF genes & repeats Primary hematopoietic stem cells blood
36 chr19:37257800-37261800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr19:37258600-37260800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr19:37258800-37261200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
39 chr19:37259400-37261200 ZNF genes & repeats Ovary ovary
40 chr19:37259400-37262200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
41 chr19:37259400-37262200 ZNF genes & repeats K562 blood
42 chr19:37259400-37262400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
43 chr19:37259600-37261200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
44 chr19:37259600-37261200 ZNF genes & repeats Liver Liver
45 chr19:37259600-37261400 ZNF genes & repeats Fetal Lung lung
46 chr19:37259600-37261600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
47 chr19:37259600-37262400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr19:37259800-37261600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
49 chr19:37259800-37262000 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr19:37260000-37261400 Weak transcription Right Atrium heart

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