Variant report

Variant	rs12288653
Chromosome Location	chr11:76136125-76136126
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:76135625..76138105-chr11:76141929..76143509,2	K562	blood:
2	chr11:76128297..76130000-chr11:76134830..76136691,2	K562	blood:
3	chr11:76132118..76140418-chr11:76149873..76158428,11	K562	blood:
4	chr11:76135965..76138472-chr11:76155761..76158428,2	K562	blood:

Variant related genes	Relation type
ENSG00000255135	Chromatin interaction
ENSG00000158636	Chromatin interaction

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10751254	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10899226	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236745	0.85[ASN][1000 genomes]
rs11236754	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11236774	1.00[EUR][1000 genomes]
rs11820030	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12271015	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12278256	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12280236	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12288707	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12293666	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17134872	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17134897	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2508754	1.00[EUR][1000 genomes]
rs2510905	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2513506	1.00[EUR][1000 genomes]
rs2513507	1.00[EUR][1000 genomes]
rs2513509	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2513519	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2513521	0.84[ASN][1000 genomes]
rs4245444	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4290257	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4421765	0.96[ASN][1000 genomes]
rs4603332	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58576354	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6592638	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6592643	0.92[ASN][1000 genomes]
rs7105179	1.00[EUR][1000 genomes]
rs7123914	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7939908	1.00[EUR][1000 genomes]
rs7945459	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76135400-76136200	Flanking Active TSS	GM12878-XiMat	blood

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