Variant report

Variant	rs12291940
Chromosome Location	chr11:45792321-45792322
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11038654	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11038656	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12271020	1.00[EUR][1000 genomes]
rs12272338	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12272905	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12282904	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12289812	1.00[EUR][1000 genomes]
rs12295162	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2457964	0.85[EUR][1000 genomes]
rs2593736	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2593743	0.85[EUR][1000 genomes]
rs2593744	0.85[EUR][1000 genomes]
rs2593748	0.85[EUR][1000 genomes]
rs28826038	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58042321	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73466377	1.00[EUR][1000 genomes]
rs73468335	0.84[EUR][1000 genomes]
rs7480518	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45787200-45792400	Weak transcription	Fetal Heart	heart
2	chr11:45787800-45792600	Weak transcription	Right Ventricle	heart
3	chr11:45788400-45792600	Weak transcription	Gastric	stomach
4	chr11:45788400-45792600	Weak transcription	Pancreas	Pancrea
5	chr11:45788600-45792600	Weak transcription	Left Ventricle	heart
6	chr11:45788600-45793000	Weak transcription	Right Atrium	heart
7	chr11:45788800-45792600	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr11:45789400-45793000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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