The 2.0 version of rSNPBase

Variant report

Variant rs12292194
Chromosome Location chr11:17360419-17360420
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17299000-17360600 Weak transcription Small Intestine intestine
2 chr11:17308200-17360800 Strong transcription Fetal Thymus thymus
3 chr11:17308200-17372600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr11:17308400-17361600 Weak transcription Brain Inferior Temporal Lobe brain
5 chr11:17316000-17361000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr11:17320800-17372400 Weak transcription GM12878-XiMat blood
7 chr11:17331800-17362000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr11:17334000-17371000 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr11:17335600-17361000 Strong transcription Dnd41 blood
10 chr11:17336200-17372600 Weak transcription HUVEC blood vessel
11 chr11:17336400-17360800 Weak transcription HSMM muscle
12 chr11:17336800-17365000 Weak transcription NHEK skin
13 chr11:17350400-17365200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr11:17350800-17364800 Weak transcription NHLF lung
15 chr11:17351200-17361400 Weak transcription Pancreas Pancrea
16 chr11:17352400-17365800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr11:17352600-17365400 Weak transcription HMEC breast
18 chr11:17354000-17365200 Weak transcription Muscle Satellite Cultured Cells --
19 chr11:17354200-17364800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr11:17354200-17369200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr11:17354400-17373000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr11:17354600-17365600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr11:17354600-17372400 Weak transcription Liver Liver
24 chr11:17355200-17365400 Weak transcription NH-A brain
25 chr11:17355600-17364800 Weak transcription NHDF-Ad bronchial
26 chr11:17356000-17360600 Weak transcription Fetal Muscle Leg muscle
27 chr11:17356000-17364800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr11:17356000-17365400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr11:17356000-17367600 Weak transcription Primary hematopoietic stem cells blood
30 chr11:17356000-17371000 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr11:17356000-17372200 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr11:17356000-17372400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr11:17356000-17372600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr11:17356000-17372600 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr11:17356000-17372800 Weak transcription Primary T cells fromperipheralblood blood
36 chr11:17356000-17372800 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr11:17356200-17361800 Weak transcription Placenta Placenta
38 chr11:17356200-17362400 Weak transcription Lung lung
39 chr11:17356200-17365000 Weak transcription Primary T cells from cord blood blood
40 chr11:17356200-17365000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr11:17356200-17365400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr11:17356200-17372400 Weak transcription Primary monocytes fromperipheralblood blood
43 chr11:17356200-17372400 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr11:17356200-17372400 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr11:17356200-17372600 Weak transcription Adipose Nuclei Adipose
46 chr11:17356200-17372800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr11:17356200-17372800 Weak transcription Aorta Aorta
48 chr11:17356200-17372800 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr11:17356200-17372800 Weak transcription Ovary ovary
50 chr11:17356200-17373000 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015