The 2.0 version of rSNPBase

Variant report

Variant rs12294594
Chromosome Location chr11:34955674-34955675
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34938800-34957400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr11:34938800-34990400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:34939200-34956000 Weak transcription Fetal Muscle Trunk muscle
4 chr11:34939200-35000000 Weak transcription Thymus Thymus
5 chr11:34939600-34962600 Weak transcription Right Ventricle heart
6 chr11:34939800-34960400 Weak transcription Brain Inferior Temporal Lobe brain
7 chr11:34940000-34959200 Weak transcription Fetal Brain Male brain
8 chr11:34940000-34963800 Weak transcription Spleen Spleen
9 chr11:34940200-34970400 Weak transcription Left Ventricle heart
10 chr11:34940200-34984800 Weak transcription Fetal Stomach stomach
11 chr11:34940400-34957000 Weak transcription Brain Germinal Matrix brain
12 chr11:34940400-34959200 Weak transcription Rectal Smooth Muscle rectum
13 chr11:34940400-34959400 Weak transcription Fetal Brain Female brain
14 chr11:34940400-34962600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr11:34940600-34957400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr11:34940800-34957000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr11:34943800-34961600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr11:34946200-34958600 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr11:34948000-34990600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr11:34948000-35000400 Weak transcription Stomach Smooth Muscle stomach
21 chr11:34948000-35006800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr11:34948200-34957600 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr11:34948200-34957800 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr11:34948200-34960200 Weak transcription HMEC breast
25 chr11:34948200-34997000 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr11:34948400-34958600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr11:34948600-34990400 Weak transcription HUVEC blood vessel
28 chr11:34948800-34965000 Weak transcription HSMM muscle
29 chr11:34949000-34961200 Weak transcription GM12878-XiMat blood
30 chr11:34949200-34961000 Weak transcription Osteobl bone
31 chr11:34949200-34990400 Weak transcription NHEK skin
32 chr11:34949400-34960400 Weak transcription Fetal Heart heart
33 chr11:34950200-34957000 Weak transcription Hela-S3 cervix
34 chr11:34950400-34991600 Weak transcription NHLF lung
35 chr11:34951000-34965200 Weak transcription Gastric stomach
36 chr11:34951000-34970400 Weak transcription Aorta Aorta
37 chr11:34951000-34970400 Weak transcription Ovary ovary
38 chr11:34951000-34981400 Weak transcription Brain Cingulate Gyrus brain
39 chr11:34951400-34957800 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr11:34951400-34986600 Weak transcription Fetal Thymus thymus
41 chr11:34951600-34957400 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr11:34951600-34959800 Weak transcription Colon Smooth Muscle Colon
43 chr11:34951600-34963400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr11:34951600-34992000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr11:34951800-34958600 Weak transcription Colonic Mucosa Colon
46 chr11:34951800-34970400 Weak transcription Pancreas Pancrea
47 chr11:34951800-34985000 Weak transcription Lung lung
48 chr11:34951800-34988200 Weak transcription Fetal Intestine Small intestine
49 chr11:34951800-35000200 Weak transcription Psoas Muscle Psoas
50 chr11:34952000-34958600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015