Variant report

Variant	rs12304110
Chromosome Location	chr12:48307883-48307884
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10083198	0.84[ASN][1000 genomes]
rs10783219	0.86[ASN][1000 genomes]
rs10875699	0.89[ASN][1000 genomes]
rs12304114	0.85[EUR][1000 genomes]
rs4578458	0.89[ASN][1000 genomes]
rs4760603	0.87[ASN][1000 genomes]
rs4760655	0.85[ASN][1000 genomes]
rs4760669	0.89[ASN][1000 genomes]
rs6580644	0.90[ASN][1000 genomes]
rs7132324	0.90[ASN][1000 genomes]
rs7299460	0.90[ASN][1000 genomes]
rs7312286	0.87[ASN][1000 genomes]
rs7970314	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428589	chr12:48282920-48341192	Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:48307800-48308000	Enhancers	Duodenum Mucosa	Duodenum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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