Variant report

Variant	rs1231185
Chromosome Location	chr11:121823402-121823403
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1219431	0.83[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs1219432	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs1219433	0.83[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs1219434	0.80[ASN][1000 genomes]
rs1448132	0.83[AFR][1000 genomes]
rs1448133	0.83[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs1789750	0.83[AFR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556478	chr11:121816920-121840829	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121821600-121823600	Weak transcription	HepG2	liver
2	chr11:121822800-121824200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr11:121822800-121825000	Enhancers	Liver	Liver
4	chr11:121823000-121824200	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr11:121823400-121824200	Enhancers	Brain Substantia Nigra	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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