Variant report

Variant	rs1219432
Chromosome Location	chr11:121824132-121824133
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:121822688..121824829-chr11:121928249..121930880,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11218469	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11218470	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11218472	0.84[AFR][1000 genomes]
rs11605389	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11607848	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1219431	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1219433	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1219434	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1219450	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1219454	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1219458	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1219460	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1231185	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs1375013	0.84[AFR][1000 genomes]
rs1375014	0.85[AFR][1000 genomes]
rs1448130	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1448131	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1448132	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1448133	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1789750	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4016823	0.87[AFR][1000 genomes]
rs7925712	0.87[ASN][1000 genomes]
rs7926019	0.86[ASN][1000 genomes]
rs7934592	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556478	chr11:121816920-121840829	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121822800-121824200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr11:121822800-121825000	Enhancers	Liver	Liver
3	chr11:121823000-121824200	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr11:121823400-121824200	Enhancers	Brain Substantia Nigra	brain
5	chr11:121823600-121824400	Enhancers	HepG2	liver
6	chr11:121824000-121832000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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