The 2.0 version of rSNPBase

Variant report

Variant rs12315459
Chromosome Location chr12:57723176-57723177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57691000-57736200 Weak transcription Right Atrium heart
2 chr12:57693600-57743800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr12:57694000-57780000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr12:57694200-57734000 Weak transcription Rectal Smooth Muscle rectum
5 chr12:57694400-57732400 Weak transcription Ovary ovary
6 chr12:57694400-57735000 Weak transcription Psoas Muscle Psoas
7 chr12:57695200-57794600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr12:57697000-57726000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr12:57697000-57735400 Weak transcription Right Ventricle heart
10 chr12:57697200-57734000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr12:57697200-57745000 Weak transcription Lung lung
12 chr12:57699800-57762400 Weak transcription Left Ventricle heart
13 chr12:57700000-57733800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr12:57700000-57736000 Weak transcription Fetal Brain Male brain
15 chr12:57703400-57733800 Weak transcription Primary hematopoietic stem cells blood
16 chr12:57703400-57734600 Weak transcription Stomach Smooth Muscle stomach
17 chr12:57703400-57742000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr12:57703800-57723400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr12:57703800-57725000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr12:57703800-57726600 Weak transcription Colon Smooth Muscle Colon
21 chr12:57704000-57726400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr12:57704200-57725400 Weak transcription Thymus Thymus
23 chr12:57704200-57728200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr12:57704200-57728800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr12:57704200-57733600 Weak transcription HSMM muscle
26 chr12:57704200-57743200 Weak transcription Duodenum Mucosa Duodenum
27 chr12:57704400-57724800 Weak transcription Fetal Muscle Trunk muscle
28 chr12:57704400-57725800 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr12:57704400-57733800 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr12:57704400-57789200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr12:57706000-57724200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr12:57706400-57732200 Weak transcription Primary T cells fromperipheralblood blood
33 chr12:57708000-57724600 Weak transcription Fetal Stomach stomach
34 chr12:57709800-57746800 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr12:57712800-57735400 Weak transcription NHLF lung
36 chr12:57713600-57723800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr12:57713600-57733000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr12:57713600-57733800 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr12:57713800-57723200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr12:57713800-57724800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr12:57713800-57726200 Weak transcription NHEK skin
42 chr12:57713800-57726200 Weak transcription Osteobl bone
43 chr12:57713800-57726400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr12:57713800-57727000 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr12:57713800-57745800 Weak transcription Stomach Mucosa stomach
46 chr12:57714400-57723200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr12:57714400-57726200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr12:57714400-57733600 Weak transcription Adipose Nuclei Adipose
49 chr12:57714400-57736200 Weak transcription Fetal Lung lung
50 chr12:57714600-57726400 Weak transcription A549 lung

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Last update: Aug 31, 2015