The 2.0 version of rSNPBase

Variant report

Variant rs13377950
Chromosome Location chr12:57759299-57759300
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57694000-57780000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:57695200-57794600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr12:57699800-57762400 Weak transcription Left Ventricle heart
4 chr12:57704400-57789200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr12:57722000-57765200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr12:57722800-57771200 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr12:57722800-57786200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr12:57726000-57759800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr12:57727200-57764400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr12:57728000-57766600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr12:57731400-57789800 Weak transcription Small Intestine intestine
12 chr12:57731600-57796000 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr12:57732800-57771800 Weak transcription Primary T cells fromperipheralblood blood
14 chr12:57733600-57762400 Weak transcription Thymus Thymus
15 chr12:57734200-57779400 Weak transcription Spleen Spleen
16 chr12:57734400-57760000 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr12:57735200-57764400 Weak transcription Stomach Smooth Muscle stomach
18 chr12:57736400-57765600 Weak transcription Ovary ovary
19 chr12:57736400-57784200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr12:57736400-57795000 Weak transcription Right Ventricle heart
21 chr12:57736600-57782000 Weak transcription Muscle Satellite Cultured Cells --
22 chr12:57736600-57782400 Weak transcription HSMM muscle
23 chr12:57736600-57782800 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr12:57736800-57759800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr12:57736800-57764400 Weak transcription HSMMtube muscle
26 chr12:57736800-57766000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr12:57740400-57784000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr12:57741000-57760200 Weak transcription Fetal Thymus thymus
29 chr12:57741200-57765000 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr12:57741200-57782800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr12:57741800-57760200 Weak transcription Primary B cells from peripheral blood blood
32 chr12:57742000-57759800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr12:57742000-57759800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr12:57742000-57762400 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr12:57742200-57759600 Weak transcription Primary hematopoietic stem cells blood
36 chr12:57742200-57760000 Weak transcription Fetal Lung lung
37 chr12:57742400-57785800 Weak transcription Fetal Brain Female brain
38 chr12:57742800-57759800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr12:57742800-57760000 Weak transcription Dnd41 blood
40 chr12:57743000-57759800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr12:57744600-57759800 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr12:57745000-57762600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr12:57745000-57787800 Weak transcription Placenta Placenta
44 chr12:57745200-57759400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:57745200-57762000 Weak transcription Duodenum Mucosa Duodenum
46 chr12:57745200-57765600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr12:57745400-57772200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr12:57748800-57759800 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr12:57748800-57760000 Weak transcription Fetal Muscle Leg muscle
50 chr12:57749400-57765400 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015