Variant report

Variant	rs12318722
Chromosome Location	chr12:103509590-103509591
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11613585	1.00[JPT][hapmap]
rs11615631	1.00[JPT][hapmap]
rs12312776	1.00[ASN][1000 genomes]
rs12313548	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12318972	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17033429	1.00[ASN][1000 genomes]
rs17033447	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73183655	1.00[ASN][1000 genomes]
rs73183658	1.00[ASN][1000 genomes]
rs73183659	1.00[ASN][1000 genomes]
rs73183660	1.00[ASN][1000 genomes]
rs73183661	1.00[ASN][1000 genomes]
rs73183663	1.00[ASN][1000 genomes]
rs73183668	1.00[ASN][1000 genomes]
rs73183672	1.00[ASN][1000 genomes]
rs73183673	1.00[ASN][1000 genomes]
rs73183674	1.00[ASN][1000 genomes]
rs73183675	1.00[ASN][1000 genomes]
rs73183676	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832501	chr12:103463927-103648825	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
2	esv1824379	chr12:103501562-103549931	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103508400-103509600	Enhancers	Stomach Mucosa	stomach
2	chr12:103508400-103511200	Enhancers	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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