The 2.0 version of rSNPBase

Variant report

Variant rs12322316
Chromosome Location chr12:42556108-42556109
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42539200-42563800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr12:42539400-42577000 Weak transcription Aorta Aorta
3 chr12:42539400-42583200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr12:42539600-42556200 Weak transcription HSMMtube muscle
5 chr12:42539600-42574000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr12:42539600-42578400 Weak transcription Left Ventricle heart
7 chr12:42539600-42586000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr12:42539800-42568600 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr12:42539800-42569000 Weak transcription Fetal Kidney kidney
10 chr12:42539800-42582800 Weak transcription Spleen Spleen
11 chr12:42539800-42607800 Weak transcription Pancreas Pancrea
12 chr12:42540000-42574800 Weak transcription Brain Anterior Caudate brain
13 chr12:42546000-42564400 Weak transcription Fetal Muscle Trunk muscle
14 chr12:42547200-42563800 Weak transcription Fetal Stomach stomach
15 chr12:42547800-42610400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr12:42549400-42575000 Weak transcription Brain Angular Gyrus brain
17 chr12:42550400-42556200 Weak transcription Fetal Heart heart
18 chr12:42550600-42557400 Weak transcription Colonic Mucosa Colon
19 chr12:42550600-42615800 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr12:42550800-42568400 Weak transcription Right Ventricle heart
21 chr12:42551400-42557800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr12:42552000-42604000 Weak transcription Stomach Smooth Muscle stomach
23 chr12:42552200-42557400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr12:42552200-42574800 Weak transcription Brain Inferior Temporal Lobe brain
25 chr12:42552200-42591200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr12:42552200-42613000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr12:42552400-42620000 Weak transcription Fetal Brain Female brain
28 chr12:42552600-42578800 Weak transcription Lung lung
29 chr12:42552800-42564400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr12:42553200-42556200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr12:42553400-42556600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr12:42553400-42571200 Weak transcription Esophagus oesophagus
33 chr12:42553600-42590000 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr12:42554000-42562800 Weak transcription Small Intestine intestine
35 chr12:42554000-42607600 Weak transcription Rectal Smooth Muscle rectum
36 chr12:42554200-42556200 Strong transcription Primary T regulatory cells fromperipheralblood blood
37 chr12:42554400-42564200 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr12:42554400-42578600 Weak transcription Thymus Thymus
39 chr12:42554600-42556800 Weak transcription K562 blood
40 chr12:42554600-42561600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr12:42554600-42563400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr12:42554600-42568200 Weak transcription Primary hematopoietic stem cells blood
43 chr12:42554600-42570800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr12:42554600-42592200 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr12:42554800-42568800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr12:42554800-42571000 Weak transcription HepG2 liver
47 chr12:42555000-42556400 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr12:42555000-42556800 Weak transcription Brain Germinal Matrix brain
49 chr12:42555000-42564200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr12:42555000-42565200 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015