The 2.0 version of rSNPBase

Variant report

Variant rs12334414
Chromosome Location chr8:120867446-120867447
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:120846200-120867600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:120846200-120867600 Weak transcription Gastric stomach
3 chr8:120846200-120867600 Weak transcription Pancreas Pancrea
4 chr8:120850400-120867600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr8:120853000-120867600 Weak transcription Aorta Aorta
6 chr8:120865400-120868600 Active TSS GM12878-XiMat blood
7 chr8:120866000-120868600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr8:120866000-120868600 Active TSS iPS-20b Cell Line embryonic stem cell
9 chr8:120866000-120868800 Active TSS iPS-15b Cell Line embryonic stem cell
10 chr8:120866200-120867800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
11 chr8:120866200-120868400 Active TSS H1 Cell Line embryonic stem cell
12 chr8:120866400-120867600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr8:120866400-120867800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
14 chr8:120866400-120868800 Active TSS HUES64 Cell Line embryonic stem cell
15 chr8:120866400-120869000 Active TSS ES-I3 Cell Line embryonic stem cell
16 chr8:120866600-120868600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr8:120866600-120869200 Active TSS H9 Cell Line embryonic stem cell
18 chr8:120866800-120867600 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr8:120866800-120867600 Flanking Active TSS Hela-S3 cervix
20 chr8:120866800-120867800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr8:120866800-120867800 Flanking Active TSS Brain Germinal Matrix brain
22 chr8:120866800-120867800 Flanking Active TSS HMEC breast
23 chr8:120866800-120868000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr8:120866800-120868000 Flanking Active TSS Thymus Thymus
25 chr8:120867000-120867600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr8:120867000-120867600 Enhancers Primary monocytes fromperipheralblood blood
27 chr8:120867000-120867600 Enhancers Primary B cells from peripheral blood blood
28 chr8:120867000-120867600 Flanking Active TSS Muscle Satellite Cultured Cells --
29 chr8:120867000-120867600 Enhancers Primary mononuclear cells fromperipheralblood Blood
30 chr8:120867000-120867600 Enhancers Placenta Amnion Placenta Amnion
31 chr8:120867000-120867800 Flanking Active TSS Fetal Brain Female brain
32 chr8:120867000-120867800 Flanking Active TSS Fetal Intestine Small intestine
33 chr8:120867000-120867800 Flanking Active TSS Fetal Lung lung
34 chr8:120867000-120867800 Flanking Active TSS Fetal Thymus thymus
35 chr8:120867000-120868000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr8:120867000-120868000 Flanking Active TSS Duodenum Mucosa Duodenum
37 chr8:120867000-120868600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr8:120867000-120868600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
39 chr8:120867000-120868800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
40 chr8:120867000-120868800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
41 chr8:120867000-120869000 Flanking Active TSS Primary hematopoietic stem cells blood
42 chr8:120867200-120867600 Enhancers Primary T cells fromperipheralblood blood
43 chr8:120867200-120867600 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr8:120867200-120867600 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr8:120867200-120867600 Flanking Active TSS Brain Angular Gyrus brain
46 chr8:120867200-120867600 Enhancers Colonic Mucosa Colon
47 chr8:120867200-120867600 Flanking Active TSS Fetal Brain Male brain
48 chr8:120867200-120867600 Flanking Active TSS Fetal Kidney kidney
49 chr8:120867200-120867600 Enhancers Small Intestine intestine
50 chr8:120867200-120867600 Enhancers Spleen Spleen

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Last update: Aug 31, 2015