Variant report

Variant rs12343467
Chromosome Location chr9:516460-516461
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:506000-520000 Weak transcription Aorta Aorta
2 chr9:506000-520200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr9:506200-517800 Weak transcription Colonic Mucosa Colon
4 chr9:506400-519600 Weak transcription Colon Smooth Muscle Colon
5 chr9:506600-517600 Weak transcription Fetal Intestine Large intestine
6 chr9:506600-517600 Weak transcription Fetal Intestine Small intestine
7 chr9:506800-517600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr9:506800-517600 Weak transcription NHEK skin
9 chr9:507000-516600 Weak transcription Left Ventricle heart
10 chr9:507000-532600 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr9:508400-522400 Weak transcription Fetal Muscle Leg muscle
12 chr9:511600-518200 Weak transcription A549 lung
13 chr9:512000-517400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr9:512200-516800 Weak transcription Pancreas Pancrea
15 chr9:512200-518400 Weak transcription Small Intestine intestine
16 chr9:512400-522400 Weak transcription Right Ventricle heart
17 chr9:513000-516800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr9:513200-518200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr9:513400-516800 Weak transcription Brain Anterior Caudate brain
20 chr9:513400-520800 Weak transcription Fetal Lung lung
21 chr9:513400-521000 Weak transcription Brain Substantia Nigra brain
22 chr9:513400-522400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr9:513600-516600 Weak transcription Brain Hippocampus Middle brain
24 chr9:513600-522800 Weak transcription Brain Cingulate Gyrus brain
25 chr9:514000-532200 Weak transcription Fetal Muscle Trunk muscle
26 chr9:514400-517400 Enhancers Primary T cells from cord blood blood
27 chr9:514400-518400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr9:514600-518400 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr9:514800-519400 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr9:515000-518000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr9:515600-516600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr9:515600-516600 Enhancers Fetal Heart heart
33 chr9:515600-516800 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr9:515800-516600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
35 chr9:515800-518400 Enhancers Primary T helper cells fromperipheralblood blood
36 chr9:516000-516600 Enhancers Duodenum Mucosa Duodenum
37 chr9:516000-521400 Enhancers Primary T helper cells PMA-I stimulated --
38 chr9:516200-517000 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr9:516200-518400 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr9:516200-520800 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr9:516400-517000 Enhancers Primary T cells fromperipheralblood blood
42 chr9:516400-517400 Enhancers Sigmoid Colon Sigmoid Colon

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