Variant report

Variant	rs12347535
Chromosome Location	chr9:118123-118124
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:14)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:14 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr9:118099-118292	GM12878	blood:	n/a	n/a
2	POLR2A	chr9:118081-118123	HepG2	liver:	n/a	n/a
3	POLR2A	chr9:117777-119515	GM12892	blood:	n/a	n/a
4	FOSL2	chr9:116314-119003	HepG2	liver:	n/a	n/a
5	POLR2A	chr9:116671-118227	A549	lung:	n/a	n/a
6	POU2F2	chr9:117842-118214	GM12878	blood:	n/a	n/a
7	POLR2A	chr9:117609-118202	A549	lung:	n/a	n/a
8	POU2F2	chr9:117450-118995	GM12891	blood:	n/a	n/a
9	POLR2A	chr9:117718-119487	GM12878	blood:	n/a	n/a
10	POLR2A	chr9:117380-118137	HepG2	liver:	n/a	n/a
11	TCF3	chr9:117529-118164	GM12878	blood:	n/a	chr9:118125-118134
12	SUZ12	chr9:118104-118291	H1-hESC	embryonic stem cell:	n/a	n/a
13	POLR2A	chr9:117504-119193	H1-hESC	embryonic stem cell:	n/a	n/a
14	POLR2A	chr9:118002-118173	A549	lung:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:118091-118141	Hela-S3	cervix:	n/a
2	chr9:118091-118141	NH-A	brain:	n/a
3	chr9:118091-118141	H1-hESC	embryonic stem cell:	embryo
4	chr9:118091-118141	SAEC	small airway:	n/a
5	chr9:118091-118141	HIPEpiC	eye:	n/a
6	chr9:118091-118141	AG04449	skin:	fetal
7	chr9:118091-118141	SKMC	muscle:	n/a
8	chr9:118091-118141	NB4	blood:	n/a
9	chr9:118091-118141	GM19239	blood:	n/a
10	chr9:118091-118141	HPAEpiC	pulmonary alveolar:	n/a
11	chr9:118091-118141	RPTEC	kidney:	n/a
12	chr9:118091-118141	HRCEpiC	kidney:	n/a
13	chr9:118091-118141	HCF	heart:	n/a
14	chr9:118091-118141	NHDF-neo	bronchial:	n/a
15	chr9:118091-118141	GM12892	blood:	n/a
16	chr9:118091-118141	NT2-D1	testis:	n/a
17	chr9:118091-118141	HNPCEpiC	eye:	n/a
18	chr9:118091-118141	HEK293	kidney:	embryo
19	chr9:118091-118141	MCF-7	breast:	n/a
20	chr9:118091-118141	HCM	heart:	n/a
21	chr9:118091-118141	A549	lung:	n/a
22	chr9:118091-118141	AG10803	skin:	n/a
23	chr9:118091-118141	AG04450	lung:	fetal
24	chr9:118091-118141	HRE	kidney:	n/a
25	chr9:118091-118141	PrEC	prostate:	n/a
26	chr9:118091-118141	HEEpiC	esophagus:	n/a
27	chr9:118091-118141	Jurkat	blood:	n/a
28	chr9:118091-118141	PFSK-1	brain:	n/a
29	chr9:118091-118141	HUVEC	blood vessel:	n/a
30	chr9:118091-118141	T-47D	breast:	n/a
31	chr9:118091-118141	ProgFib	skin:	n/a
32	chr9:118091-118141	Hepatocyte	liver:	n/a
33	chr9:118091-118141	SK-N-SH_RA	brain:	n/a
34	chr9:118091-118141	PANC-1	pancreas:	n/a
35	chr9:118091-118141	HCT-116	colon:	n/a
36	chr9:118091-118141	NHBE	bronchial:	n/a
37	chr9:118091-118141	MCF10A-Er-Src	breast:	n/a
38	chr9:118091-118141	CMK	blood:	n/a
39	chr9:118091-118141	AG09309	skin:	n/a
40	chr9:118091-118141	BE2_C	brain:	n/a
41	chr9:118091-118141	Caco-2	colon:	n/a
42	chr9:118091-118141	HAEpiC	amniotic membrane:	n/a
43	chr9:118091-118141	GM12878	blood:	n/a
44	chr9:118091-118141	HCPEpiC	choroid plexus:	n/a
45	chr9:118091-118141	IMR90	lung:	fetal
46	chr9:118091-118141	GM12891	blood:	n/a
47	chr9:118091-118141	SK-N-MC	brain:	n/a
48	chr9:118091-118141	U87	brain:	n/a
49	chr9:118091-118141	HL-60	blood:	n/a
50	chr9:118091-118141	HepG2	liver:	n/a

No data

Variant related genes	Relation type
ENSG00000231808	TF binding region
ENSG00000231808	CpG island

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10114459	1.00[AMR][1000 genomes]
rs10453175	1.00[AMR][1000 genomes]
rs12338228	1.00[AMR][1000 genomes]
rs12352690	1.00[AMR][1000 genomes]
rs12352691	1.00[AMR][1000 genomes]
rs12353065	1.00[AMR][1000 genomes]
rs7872275	1.00[AMR][1000 genomes]
rs9657568	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:61 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891939	chr9:10001-129899	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island lncRNA miRNA	10 gene(s)	inside rSNPs	diseases
2	nsv949672	chr9:13091-274606	Bivalent Enhancer Bivalent/Poised TSS Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
3	nsv948701	chr9:13091-499586	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
4	nsv949346	chr9:13091-776349	Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
5	nsv482863	chr9:31933-129899	Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island lncRNA	8 gene(s)	inside rSNPs	diseases
6	nsv427835	chr9:31994-235675	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
7	esv2758174	chr9:31994-383816	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
8	esv2759654	chr9:31994-383816	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
9	nsv612981	chr9:39037-290841	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
10	esv2755034	chr9:40910-242797	Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
11	esv34610	chr9:40910-271132	Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
12	esv2752301	chr9:40910-274606	Active TSS Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
13	esv2752302	chr9:40910-274606	Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
14	esv2752303	chr9:40910-277989	Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
15	nsv429974	chr9:40910-289061	Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
16	esv34714	chr9:40910-317370	Strong transcription Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
17	esv2752304	chr9:40910-409398	Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
18	nsv948375	chr9:40910-439102	Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
19	esv2764172	chr9:40910-593899	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
20	nsv949051	chr9:40910-925305	Bivalent Enhancer Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	esv2753749	chr9:46431-266505	Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
22	esv2752306	chr9:46431-499586	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
23	nsv891940	chr9:46587-204201	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island lncRNA	6 gene(s)	inside rSNPs	diseases
24	nsv1029900	chr9:46587-208456	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
25	nsv1031865	chr9:46587-218183	Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
26	nsv1031410	chr9:46587-230228	Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
27	nsv1027808	chr9:46587-245752	Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
28	nsv1026296	chr9:46587-261945	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
29	nsv1031167	chr9:46587-272950	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
30	nsv1015933	chr9:46587-289419	Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
31	nsv1026546	chr9:46587-290670	Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
32	nsv1032144	chr9:46587-292002	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
33	nsv1033678	chr9:46587-319961	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
34	nsv1033923	chr9:46587-322795	ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
35	nsv1015879	chr9:46587-360382	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
36	nsv1021015	chr9:46587-370439	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
37	nsv1034651	chr9:46587-399040	Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
38	nsv515505	chr9:46587-449700	Enhancers Genic enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
39	nsv1024015	chr9:46587-449798	Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
40	nsv1033067	chr9:46587-499586	Bivalent Enhancer Strong transcription Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Enhancers Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
41	nsv1018439	chr9:46587-518103	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
42	esv17766	chr9:48710-209354	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
43	nsv530903	chr9:52389-356138	Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
44	esv2757299	chr9:57964-362209	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
45	nsv8403	chr9:62805-324255	Genic enhancers Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
46	nsv891941	chr9:84832-208549	Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
47	nsv891942	chr9:84832-257973	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
48	nsv1023234	chr9:88018-309054	Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
49	nsv1033689	chr9:88018-358384	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
50	nsv972637	chr9:93226-121450	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116600-118400	Bivalent Enhancer	Primary B cells from peripheral blood	blood
2	chr9:116600-118600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
3	chr9:116800-118200	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
4	chr9:116800-118200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
5	chr9:116800-118200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr9:116800-118200	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr9:116800-118200	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr9:116800-118400	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
9	chr9:116800-118600	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
10	chr9:117000-118200	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
11	chr9:117000-118200	Bivalent Enhancer	Colonic Mucosa	Colon
12	chr9:117000-118400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
13	chr9:117200-118400	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
14	chr9:117400-118200	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr9:117400-118200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
16	chr9:117400-118200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
17	chr9:117600-118200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
18	chr9:117600-118200	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr9:117600-118200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr9:117600-118200	Bivalent/Poised TSS	Fetal Brain Female	brain
21	chr9:117600-118200	Bivalent/Poised TSS	Thymus	Thymus
22	chr9:117600-118400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
23	chr9:117600-118400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
24	chr9:117600-118400	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr9:117600-118400	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
26	chr9:117600-118400	Enhancers	Spleen	Spleen
27	chr9:117600-118600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
28	chr9:117800-118200	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
29	chr9:117800-118200	Enhancers	Placenta	Placenta
30	chr9:117800-118400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
31	chr9:118000-118200	Flanking Bivalent TSS/Enh	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr9:118000-118200	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
33	chr9:118000-118200	Bivalent/Poised TSS	Primary T regulatory cells fromperipheralblood	blood
34	chr9:118000-118200	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr9:118000-118200	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
36	chr9:118000-118200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr9:118000-118200	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
38	chr9:118000-118200	Bivalent Enhancer	Rectal Mucosa Donor 31	rectum
39	chr9:118000-118200	Enhancers	Right Ventricle	heart
40	chr9:118000-118200	Enhancers	GM12878-XiMat	blood
41	chr9:118000-118400	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr9:118000-118400	Bivalent Enhancer	Primary hematopoietic stem cells	blood
43	chr9:118000-118400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
44	chr9:118000-118400	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
45	chr9:118000-118400	Bivalent Enhancer	Fetal Thymus	thymus
46	chr9:118000-118800	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung

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