The 2.0 version of rSNPBase

Variant report

Variant rs12356457
Chromosome Location chr10:28570507-28570508
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:28550400-28582600 Weak transcription Primary T cells fromperipheralblood blood
2 chr10:28553000-28570800 Weak transcription Esophagus oesophagus
3 chr10:28556200-28570800 Weak transcription Primary B cells from cord blood blood
4 chr10:28556400-28571000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr10:28559600-28570800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr10:28562600-28570800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr10:28564000-28573200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr10:28564200-28573200 Weak transcription Primary T cells from cord blood blood
9 chr10:28564400-28570800 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr10:28564800-28570800 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr10:28564800-28572800 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr10:28564800-28573000 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr10:28565000-28571000 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr10:28566200-28571000 Weak transcription HepG2 liver
15 chr10:28566800-28573000 Weak transcription Rectal Smooth Muscle rectum
16 chr10:28568200-28570800 Weak transcription Fetal Muscle Leg muscle
17 chr10:28568400-28570600 Enhancers Skeletal Muscle Female skeletal muscle
18 chr10:28568400-28570800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr10:28568400-28570800 Enhancers Skeletal Muscle Male skeletal muscle
20 chr10:28568400-28573200 Weak transcription Right Ventricle heart
21 chr10:28568800-28570800 Enhancers Osteobl bone
22 chr10:28568800-28571200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr10:28568800-28571200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr10:28568800-28571400 Enhancers Muscle Satellite Cultured Cells --
25 chr10:28569000-28571800 Enhancers Stomach Smooth Muscle stomach
26 chr10:28569000-28578400 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr10:28569200-28570800 Weak transcription Primary monocytes fromperipheralblood blood
28 chr10:28569400-28570600 Enhancers NH-A brain
29 chr10:28569400-28572400 Enhancers Colon Smooth Muscle Colon
30 chr10:28569600-28570800 Weak transcription Lung lung
31 chr10:28569600-28571800 Enhancers Pancreas Pancrea
32 chr10:28569600-28572000 Enhancers Aorta Aorta
33 chr10:28569800-28570800 Weak transcription Left Ventricle heart
34 chr10:28569800-28570800 Weak transcription Placenta Amnion Placenta Amnion
35 chr10:28569800-28570800 Weak transcription HSMM muscle
36 chr10:28569800-28571000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr10:28569800-28571000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr10:28569800-28571000 Weak transcription Psoas Muscle Psoas
39 chr10:28570000-28570600 Weak transcription Fetal Kidney kidney
40 chr10:28570200-28570600 Weak transcription Fetal Heart heart
41 chr10:28570200-28570600 Weak transcription HSMMtube muscle
42 chr10:28570400-28570600 Enhancers Pancreatic Islets Pancreatic Islet
43 chr10:28570400-28572200 Enhancers Primary neutrophils fromperipheralblood blood
44 chr10:28570400-28573200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015