The 2.0 version of rSNPBase

Variant report

Variant rs12369462
Chromosome Location chr12:26178326-26178327
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:26167400-26180600 Weak transcription Rectal Smooth Muscle rectum
2 chr12:26169400-26185400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr12:26169600-26182000 Weak transcription NHLF lung
4 chr12:26170800-26181600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr12:26170800-26182000 Weak transcription Pancreas Pancrea
6 chr12:26170800-26185600 Weak transcription Aorta Aorta
7 chr12:26171000-26182000 Weak transcription HUVEC blood vessel
8 chr12:26171000-26183800 Weak transcription Hela-S3 cervix
9 chr12:26171000-26190600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr12:26172000-26182000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr12:26172200-26180200 Weak transcription NH-A brain
12 chr12:26172200-26180400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr12:26172200-26181800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr12:26172400-26180000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr12:26172600-26180000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr12:26172600-26180000 Weak transcription NHDF-Ad bronchial
17 chr12:26173200-26180000 Weak transcription Osteobl bone
18 chr12:26173400-26186800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr12:26174200-26180600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr12:26174600-26182000 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr12:26174600-26185600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr12:26174800-26181800 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr12:26174800-26182000 Weak transcription Right Atrium heart
24 chr12:26174800-26185600 Weak transcription Ovary ovary
25 chr12:26175000-26180800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr12:26175000-26181400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr12:26175000-26181800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr12:26175000-26190600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr12:26175000-26191000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr12:26175200-26179200 Weak transcription Colon Smooth Muscle Colon
31 chr12:26175200-26182000 Weak transcription Brain Anterior Caudate brain
32 chr12:26175200-26186800 Weak transcription Psoas Muscle Psoas
33 chr12:26175200-26190800 Weak transcription Stomach Smooth Muscle stomach
34 chr12:26175400-26180200 Weak transcription Brain Hippocampus Middle brain
35 chr12:26175400-26180400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr12:26175400-26180600 Weak transcription Brain Cingulate Gyrus brain
37 chr12:26175400-26180800 Weak transcription Brain Angular Gyrus brain
38 chr12:26175400-26180800 Weak transcription Brain Substantia Nigra brain
39 chr12:26175400-26181800 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr12:26175400-26185800 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr12:26175400-26190000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr12:26176000-26184200 Weak transcription Left Ventricle heart
43 chr12:26177600-26180000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr12:26178200-26181200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015