Variant report

Variant	rs12385947
Chromosome Location	chr15:83575040-83575041
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:83549718..83551479-chr15:83574830..83576758,2	MCF-7	breast:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1021022	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1256424	0.81[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs1256436	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1256438	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1256439	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1256440	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1256441	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1256442	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1256443	0.86[AFR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1256444	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1256445	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1256446	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1256447	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1256448	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1256449	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1256450	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1256454	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17294229	0.83[AFR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2251275	0.85[AFR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2621226	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2667378	0.94[EUR][1000 genomes]
rs2667379	0.82[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs2667380	0.94[EUR][1000 genomes]
rs2667384	0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55633961	0.88[AFR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6603035	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7173264	0.93[AFR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7173683	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8031927	0.85[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs8036957	0.92[AFR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs880289	0.82[AFR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:83568200-83585400	Weak transcription	Fetal Muscle Trunk	muscle
2	chr15:83570400-83591600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr15:83573600-83582000	Weak transcription	Psoas Muscle	Psoas
4	chr15:83574000-83575800	Weak transcription	Pancreas	Pancrea
5	chr15:83574800-83579400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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