Variant report

Variant rs12387
Chromosome Location chr10:5139685-5139686
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:5136400-5140000 Active TSS Right Atrium heart
2 chr10:5136600-5147400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr10:5137000-5141200 Weak transcription Lung lung
4 chr10:5137200-5145200 Weak transcription Esophagus oesophagus
5 chr10:5137200-5145800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr10:5137200-5149800 Weak transcription Small Intestine intestine
7 chr10:5137400-5149400 Weak transcription HSMM muscle
8 chr10:5137400-5149600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr10:5137400-5149600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr10:5137400-5149800 Weak transcription Pancreas Pancrea
11 chr10:5137400-5151600 Weak transcription Brain Angular Gyrus brain
12 chr10:5137400-5151800 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr10:5137400-5152000 Weak transcription Right Ventricle heart
14 chr10:5137600-5141600 Weak transcription Brain Substantia Nigra brain
15 chr10:5137600-5147800 Weak transcription HMEC breast
16 chr10:5137800-5141800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr10:5137800-5150800 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr10:5138000-5147200 Transcr. at gene 5' and 3' A549 lung
19 chr10:5138200-5146800 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr10:5138200-5148400 Weak transcription Brain Cingulate Gyrus brain
21 chr10:5138200-5151000 Weak transcription Osteobl bone
22 chr10:5138200-5151800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr10:5138400-5140200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr10:5138400-5141200 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr10:5138600-5140800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr10:5138600-5140800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr10:5138600-5140800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr10:5138600-5142000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr10:5138600-5145000 Weak transcription Gastric stomach
30 chr10:5138600-5145200 Weak transcription Ovary ovary
31 chr10:5138600-5149200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr10:5138600-5149800 Weak transcription Rectal Smooth Muscle rectum
33 chr10:5138600-5150200 Weak transcription Brain Hippocampus Middle brain
34 chr10:5138600-5151800 Weak transcription Stomach Smooth Muscle stomach
35 chr10:5138800-5140000 Weak transcription Thymus Thymus
36 chr10:5138800-5140600 Weak transcription Aorta Aorta
37 chr10:5138800-5140800 Weak transcription Stomach Mucosa stomach
38 chr10:5138800-5141400 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr10:5138800-5147800 Weak transcription Muscle Satellite Cultured Cells --
40 chr10:5138800-5151800 Weak transcription Brain Anterior Caudate brain
41 chr10:5138800-5151800 Weak transcription Colonic Mucosa Colon
42 chr10:5138800-5152000 Weak transcription Psoas Muscle Psoas
43 chr10:5139000-5140000 Weak transcription NHDF-Ad bronchial
44 chr10:5139000-5140200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr10:5139000-5140200 Genic enhancers Hela-S3 cervix
46 chr10:5139000-5151600 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr10:5139400-5140200 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
48 chr10:5139400-5140200 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
49 chr10:5139400-5141800 Genic enhancers Liver Liver
50 chr10:5139600-5140000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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