Variant report

Variant	rs4880708
Chromosome Location	chr10:5132275-5132276
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:173)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:173 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr10:5132180-5132330	GM12874	blood:	n/a	n/a
2	CTCF	chr10:5132180-5132330	HEEpiC	esophagus:	n/a	n/a
3	RAD21	chr10:5131968-5132529	H1-hESC	embryonic stem cell:	n/a	n/a
4	CTCF	chr10:5132118-5132390	MCF-7	breast:	n/a	n/a
5	CTCF	chr10:5132140-5132290	AG09309	skin:	n/a	n/a
6	CTCF	chr10:5132202-5132314	GM19239	blood:	n/a	n/a
7	FOXA2	chr10:5131909-5132540	A549	lung:	n/a	n/a
8	CTCF	chr10:5132059-5132418	GM12878	blood:	n/a	n/a
9	STAT3	chr10:5132089-5132415	MCF10A-Er-Src	breast:	n/a	n/a
10	CTCF	chr10:5132140-5132290	GM12873	blood:	n/a	n/a
11	EP300	chr10:5131800-5132627	A549	lung:	n/a	n/a
12	CTCF	chr10:5132180-5132330	AG10803	skin:	n/a	n/a
13	CTCF	chr10:5132119-5132541	MCF-7	breast:	n/a	n/a
14	MYC	chr10:5131992-5132360	MCF10A-Er-Src	breast:	n/a	n/a
15	CTCF	chr10:5132084-5132376	IMR90	lung:	n/a	n/a
16	CTCF	chr10:5132160-5132310	HPAF	blood vessel:	n/a	n/a
17	FOS	chr10:5131995-5132392	MCF10A-Er-Src	breast:	n/a	n/a
18	CTCF	chr10:5132180-5132330	GM06990	blood:	n/a	n/a
19	CTCF	chr10:5132054-5132380	K562	blood:	n/a	n/a
20	CEBPB	chr10:5131998-5132475	A549	lung:	n/a	n/a
21	CTCF	chr10:5132160-5132310	HepG2	liver:	n/a	n/a
22	CTCF	chr10:5132043-5132450	HepG2	liver:	n/a	n/a
23	CTCF	chr10:5132140-5132290	SAEC	small airway:	n/a	n/a
24	CTCF	chr10:5132160-5132310	NHDF-neo	bronchial:	n/a	n/a
25	CEBPB	chr10:5131899-5132509	A549	lung:	n/a	n/a
26	FOXA1	chr10:5132060-5132383	T-47D	breast:	n/a	n/a
27	FOS	chr10:5131912-5132415	MCF10A-Er-Src	breast:	n/a	n/a
28	CTCF	chr10:5132180-5132330	Hela-S3	cervix:	n/a	n/a
29	CTCF	chr10:5132220-5132370	GM12872	blood:	n/a	n/a
30	CTCF	chr10:5132180-5132330	GM12864	blood:	n/a	n/a
31	CTCF	chr10:5132180-5132330	BJ	skin:	n/a	n/a
32	CTCF	chr10:5132220-5132370	A549	lung:	n/a	n/a
33	RAD21	chr10:5132112-5132407	Hela-S3	cervix:	n/a	n/a
34	CTCF	chr10:5132160-5132310	AG10803	skin:	n/a	n/a
35	CTCF	chr10:5132149-5132330	HepG2	liver:	n/a	n/a
36	CTCF	chr10:5132140-5132334	GM12878	blood:	n/a	n/a
37	SMC3	chr10:5132057-5132462	HepG2	liver:	n/a	n/a
38	CTCF	chr10:5132180-5132330	HCM	heart:	n/a	n/a
39	MYC	chr10:5131950-5132443	MCF10A-Er-Src	breast:	n/a	n/a
40	RAD21	chr10:5132082-5132480	H1-hESC	embryonic stem cell:	n/a	n/a
41	CTCF	chr10:5132140-5132290	GM12871	blood:	n/a	n/a
42	RAD21	chr10:5131968-5132511	A549	lung:	n/a	n/a
43	REST	chr10:5131932-5132540	A549	lung:	n/a	n/a
44	SP1	chr10:5131900-5132582	A549	lung:	n/a	n/a
45	CTCF	chr10:5132160-5132310	AG09309	skin:	n/a	n/a
46	CTCF	chr10:5132160-5132310	SAEC	small airway:	n/a	n/a
47	CTCF	chr10:5132260-5132410	A549	lung:	n/a	n/a
48	CTCF	chr10:5132160-5132310	MCF-7	breast:	n/a	n/a
49	FOXA1	chr10:5132098-5132548	HepG2	liver:	n/a	n/a
50	CTCF	chr10:5132180-5132330	HPAF	blood vessel:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:5131798..5132693-chr10:5325154..5326138,5	MCF-7	breast:
2	chr10:5118918..5120947-chr10:5130785..5133580,2	MCF-7	breast:
3	chr10:5124077..5126424-chr10:5132088..5134931,2	K562	blood:

No data

Variant related genes	Relation type
AKR1C3	TF binding region
ENSG00000196139	Chromatin interaction

Extended variants
information (count: 135 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:107)

rs_ID	r²[population]
rs10752001	0.85[CHB][hapmap]
rs10752005	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs10795242	0.85[CHB][hapmap]
rs10795245	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10904411	0.88[ASN][1000 genomes]
rs10904417	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10904419	0.90[ASN][1000 genomes]
rs10904421	0.85[CHB][hapmap]
rs10904432	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11252922	0.85[CHB][hapmap]
rs11253024	0.82[EUR][1000 genomes]
rs11253038	0.96[CEU][hapmap]
rs11492967	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11511661	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11511664	0.83[EUR][1000 genomes]
rs11524375	0.80[EUR][1000 genomes]
rs1155931	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12269559	0.96[CEU][hapmap]
rs12355837	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12355966	0.83[EUR][1000 genomes]
rs12356304	0.83[EUR][1000 genomes]
rs12360316	0.92[CEU][hapmap]
rs12387	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12529	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12571915	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12775468	0.92[ASN][1000 genomes]
rs12775701	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17134471	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17134523	0.85[CHB][hapmap]
rs1761601	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1761602	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1761606	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1781927	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1781935	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1781937	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1781940	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1781941	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1892404	0.92[ASN][1000 genomes]
rs1937840	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1937841	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs1937845	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1937847	1.00[CHB][hapmap];0.98[ASN][1000 genomes]
rs1937848	1.00[CHB][hapmap];0.98[ASN][1000 genomes]
rs1937849	1.00[CHB][hapmap];0.98[ASN][1000 genomes]
rs1937882	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1937904	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1937906	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1937916	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2151900	0.81[EUR][1000 genomes]
rs2154308	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2154309	0.97[ASN][1000 genomes]
rs2186175	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2211624	0.98[ASN][1000 genomes]
rs2211630	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2226260	0.92[ASN][1000 genomes]
rs2298305	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2398103	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2398195	0.92[ASN][1000 genomes]
rs2398196	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2518047	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2518049	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2801882	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2801883	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2895055	0.96[CEU][hapmap]
rs3750573	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3812617	0.85[CHB][hapmap]
rs4242785	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs4436454	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4478887	0.97[ASN][1000 genomes]
rs4622159	0.92[ASN][1000 genomes]
rs4880707	0.83[ASN][1000 genomes]
rs4880710	0.86[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs4880713	0.96[CEU][hapmap]
rs4881395	0.83[CHB][hapmap]
rs4881396	0.85[CHB][hapmap]
rs4881397	0.85[CHB][hapmap]
rs4881403	0.89[ASN][1000 genomes]
rs4881404	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs4881408	0.83[EUR][1000 genomes]
rs4881410	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6601898	0.85[CHB][hapmap]
rs6601899	0.85[CHB][hapmap]
rs6601919	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6601920	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6601921	0.83[EUR][1000 genomes]
rs7067921	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7070300	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7071406	0.83[EUR][1000 genomes]
rs7072048	0.83[EUR][1000 genomes]
rs7074004	0.85[CHB][hapmap]
rs7080497	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7087111	0.85[CHB][hapmap]
rs7089964	0.83[EUR][1000 genomes]
rs7091223	0.96[CEU][hapmap]
rs7091485	0.97[ASN][1000 genomes]
rs72478267	0.80[ASN][1000 genomes]
rs7893682	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7898263	0.85[CHB][hapmap]
rs7898341	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7901781	0.85[CHB][hapmap]
rs7902978	0.81[EUR][1000 genomes]
rs7907985	0.87[ASN][1000 genomes]
rs7914117	0.89[ASN][1000 genomes]
rs7917079	0.92[ASN][1000 genomes]
rs7918456	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7920135	0.92[ASN][1000 genomes]
rs878766	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:28 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894792	chr10:4832920-5498724	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
2	nsv948794	chr10:4863093-5227382	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv1045155	chr10:4872239-5211318	Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
4	nsv1040343	chr10:4872814-5196815	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
5	nsv540462	chr10:4872814-5196815	Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
6	nsv869470	chr10:4878904-5203685	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
7	nsv466713	chr10:4901798-5319679	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
8	nsv549881	chr10:4901798-5319679	Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
9	nsv534685	chr10:4914018-5853324	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
10	nsv1050246	chr10:4927428-5211318	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
11	nsv549882	chr10:4943518-5203864	Weak transcription Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
12	esv2763913	chr10:4961021-5321407	Enhancers Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
13	nsv430122	chr10:4986040-5134511	Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
14	nsv1039386	chr10:5008383-5348491	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
15	nsv1036566	chr10:5037926-5261426	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
16	nsv549883	chr10:5037926-5275762	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
17	nsv1036667	chr10:5076258-5133621	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
18	nsv1047484	chr10:5076258-5261482	Enhancers Strong transcription Flanking Active TSS Genic enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
19	nsv1036291	chr10:5076258-5456234	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
20	nsv1042487	chr10:5090313-5196900	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
21	nsv540463	chr10:5090313-5196900	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
22	nsv540464	chr10:5108345-5196815	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
23	nsv540465	chr10:5108345-5261482	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
24	nsv540466	chr10:5114577-5196815	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
25	nsv540467	chr10:5114577-5225365	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
26	nsv540468	chr10:5114577-5261482	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
27	nsv540469	chr10:5120774-5225365	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
28	nsv540470	chr10:5120774-5261482	Flanking Active TSS Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:5131800-5132800	Enhancers	HepG2	liver
2	chr10:5131800-5133600	Enhancers	NHEK	skin
3	chr10:5132000-5132400	Enhancers	Duodenum Mucosa	Duodenum
4	chr10:5132000-5132800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:5132000-5133200	Enhancers	A549	lung
6	chr10:5132200-5132600	Enhancers	Stomach Mucosa	stomach
7	chr10:5132200-5133600	Enhancers	HMEC	breast
8	chr10:5132200-5136200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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