The 2.0 version of rSNPBase

Variant report

Variant rs12402867
Chromosome Location chr1:145636226-145636227
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145611400-145650400 Weak transcription Aorta Aorta
2 chr1:145616000-145639600 Weak transcription Fetal Stomach stomach
3 chr1:145620800-145636600 Weak transcription Primary B cells from peripheral blood blood
4 chr1:145621200-145636600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:145621600-145646200 Weak transcription NH-A brain
6 chr1:145624800-145637200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:145626200-145636400 Weak transcription Primary B cells from cord blood blood
8 chr1:145626600-145638200 Weak transcription Fetal Intestine Large intestine
9 chr1:145627400-145637200 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:145628200-145636400 Weak transcription A549 lung
11 chr1:145628400-145636600 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:145628600-145642600 Weak transcription Ovary ovary
13 chr1:145628600-145648200 Weak transcription Esophagus oesophagus
14 chr1:145630600-145637600 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:145630600-145649200 Weak transcription NHDF-Ad bronchial
16 chr1:145630600-145652000 Weak transcription Gastric stomach
17 chr1:145630800-145646200 Weak transcription Right Ventricle heart
18 chr1:145630800-145649000 Weak transcription Rectal Smooth Muscle rectum
19 chr1:145631000-145636400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:145631000-145650000 Weak transcription Stomach Smooth Muscle stomach
21 chr1:145631200-145636600 Weak transcription Primary hematopoietic stem cells blood
22 chr1:145631200-145637200 Weak transcription Fetal Heart heart
23 chr1:145631400-145637400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr1:145631400-145637600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:145631400-145637600 Weak transcription NHLF lung
26 chr1:145632200-145636600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:145632200-145648800 Weak transcription Small Intestine intestine
28 chr1:145632400-145637400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:145632800-145636400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:145632800-145646000 Weak transcription Colon Smooth Muscle Colon
31 chr1:145633000-145636400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:145633000-145651800 Weak transcription Hela-S3 cervix
33 chr1:145634000-145636800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:145634000-145641800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:145634200-145646200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:145634400-145641000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr1:145634400-145646200 Weak transcription Brain Hippocampus Middle brain
38 chr1:145634600-145636400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:145634600-145636400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:145634600-145637200 Weak transcription Fetal Lung lung
41 chr1:145634600-145637800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:145634600-145648200 Weak transcription Brain Anterior Caudate brain
43 chr1:145634600-145649800 Weak transcription Psoas Muscle Psoas
44 chr1:145634600-145652400 Weak transcription Brain Angular Gyrus brain
45 chr1:145634600-145673000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:145634800-145641800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:145634800-145648200 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:145634800-145682600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr1:145635200-145637000 Weak transcription NHEK skin
50 chr1:145635400-145637600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015