The 2.0 version of rSNPBase

Variant report

Variant rs12405132
Chromosome Location chr1:145644984-145644985
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145611400-145650400 Weak transcription Aorta Aorta
2 chr1:145621600-145646200 Weak transcription NH-A brain
3 chr1:145628600-145648200 Weak transcription Esophagus oesophagus
4 chr1:145630600-145649200 Weak transcription NHDF-Ad bronchial
5 chr1:145630600-145652000 Weak transcription Gastric stomach
6 chr1:145630800-145646200 Weak transcription Right Ventricle heart
7 chr1:145630800-145649000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:145631000-145650000 Weak transcription Stomach Smooth Muscle stomach
9 chr1:145632200-145648800 Weak transcription Small Intestine intestine
10 chr1:145632800-145646000 Weak transcription Colon Smooth Muscle Colon
11 chr1:145633000-145651800 Weak transcription Hela-S3 cervix
12 chr1:145634200-145646200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:145634400-145646200 Weak transcription Brain Hippocampus Middle brain
14 chr1:145634600-145648200 Weak transcription Brain Anterior Caudate brain
15 chr1:145634600-145649800 Weak transcription Psoas Muscle Psoas
16 chr1:145634600-145652400 Weak transcription Brain Angular Gyrus brain
17 chr1:145634600-145673000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:145634800-145648200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:145634800-145682600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:145637800-145646000 Weak transcription Osteobl bone
21 chr1:145638000-145648600 Weak transcription Fetal Heart heart
22 chr1:145638000-145648800 Weak transcription HMEC breast
23 chr1:145638000-145649000 Weak transcription Fetal Lung lung
24 chr1:145638000-145649000 Weak transcription HSMMtube muscle
25 chr1:145638000-145651400 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr1:145638200-145647800 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr1:145638200-145648000 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr1:145638200-145649000 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:145638400-145646000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr1:145638400-145646000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:145638400-145647800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:145638400-145648000 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr1:145638600-145645800 Weak transcription Fetal Muscle Leg muscle
34 chr1:145638600-145646000 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:145638600-145646200 Weak transcription Fetal Intestine Large intestine
36 chr1:145638600-145646200 Weak transcription Fetal Thymus thymus
37 chr1:145638600-145648200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr1:145638600-145649000 Weak transcription Dnd41 blood
39 chr1:145638600-145650200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr1:145638600-145666600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr1:145638800-145646000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:145638800-145646200 Weak transcription Adipose Nuclei Adipose
43 chr1:145638800-145648200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:145638800-145648800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr1:145638800-145666400 Weak transcription Spleen Spleen
46 chr1:145639000-145646200 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:145639000-145646200 Weak transcription HUVEC blood vessel
48 chr1:145639200-145645600 Weak transcription Duodenum Mucosa Duodenum
49 chr1:145639200-145648000 Weak transcription Primary B cells from cord blood blood
50 chr1:145639400-145646000 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015