The 2.0 version of rSNPBase

Variant report

Variant rs61816194
Chromosome Location chr1:145614468-145614469
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145611000-145630200 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:145611400-145615400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr1:145611400-145616400 Weak transcription Liver Liver
4 chr1:145611400-145629800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:145611400-145633600 Weak transcription Lung lung
6 chr1:145611400-145650400 Weak transcription Aorta Aorta
7 chr1:145611600-145615400 Weak transcription Fetal Stomach stomach
8 chr1:145611600-145615400 Weak transcription Hela-S3 cervix
9 chr1:145611600-145615400 Weak transcription HUVEC blood vessel
10 chr1:145611600-145615600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:145611600-145615600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:145611600-145615600 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:145611600-145615600 Weak transcription Fetal Muscle Leg muscle
14 chr1:145611600-145615600 Weak transcription Psoas Muscle Psoas
15 chr1:145611600-145615600 Weak transcription Thymus Thymus
16 chr1:145611600-145615600 Weak transcription GM12878-XiMat blood
17 chr1:145611600-145615600 Weak transcription Osteobl bone
18 chr1:145611600-145615800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr1:145611600-145616000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:145611600-145616000 Weak transcription Fetal Thymus thymus
21 chr1:145611600-145616000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:145611600-145616200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:145611600-145616600 Weak transcription Fetal Brain Female brain
24 chr1:145611600-145616800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:145611600-145617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:145611600-145617000 Weak transcription Muscle Satellite Cultured Cells --
27 chr1:145611600-145617200 Weak transcription NH-A brain
28 chr1:145611600-145618800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:145611600-145619400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:145611600-145620800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr1:145611600-145621000 Weak transcription NHEK skin
32 chr1:145611600-145621400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:145611600-145621400 Weak transcription A549 lung
34 chr1:145611600-145621400 Weak transcription HSMM muscle
35 chr1:145611600-145621800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:145611600-145625600 Weak transcription Left Ventricle heart
37 chr1:145611600-145629400 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr1:145611600-145629600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:145611600-145630200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:145611600-145630200 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:145611600-145630200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr1:145611600-145630400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:145611600-145630400 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr1:145611600-145632000 Weak transcription K562 blood
45 chr1:145611600-145635800 Weak transcription Fetal Intestine Small intestine
46 chr1:145612600-145616800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:145612600-145621400 Weak transcription NHDF-Ad bronchial
48 chr1:145612600-145630200 Weak transcription NHLF lung
49 chr1:145612600-145634000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:145613000-145630200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015