The 2.0 version of rSNPBase

Variant report

Variant rs17354594
Chromosome Location chr1:145632500-145632501
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145611400-145633600 Weak transcription Lung lung
2 chr1:145611400-145650400 Weak transcription Aorta Aorta
3 chr1:145611600-145635800 Weak transcription Fetal Intestine Small intestine
4 chr1:145612600-145634000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:145613200-145634200 Weak transcription Dnd41 blood
6 chr1:145615800-145634400 Weak transcription Fetal Muscle Leg muscle
7 chr1:145615800-145635200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:145616000-145639600 Weak transcription Fetal Stomach stomach
9 chr1:145620800-145636600 Weak transcription Primary B cells from peripheral blood blood
10 chr1:145621200-145636600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:145621600-145646200 Weak transcription NH-A brain
12 chr1:145624800-145637200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:145626200-145636400 Weak transcription Primary B cells from cord blood blood
14 chr1:145626600-145636000 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr1:145626600-145638200 Weak transcription Fetal Intestine Large intestine
16 chr1:145627400-145637200 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:145628200-145636400 Weak transcription A549 lung
18 chr1:145628400-145636600 Weak transcription Primary T cells fromperipheralblood blood
19 chr1:145628600-145633600 Weak transcription Left Ventricle heart
20 chr1:145628600-145633600 Weak transcription Pancreas Pancrea
21 chr1:145628600-145633600 Weak transcription Right Atrium heart
22 chr1:145628600-145642600 Weak transcription Ovary ovary
23 chr1:145628600-145648200 Weak transcription Esophagus oesophagus
24 chr1:145629400-145632600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:145629800-145632600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:145629800-145632800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr1:145629800-145633000 Enhancers Brain Hippocampus Middle brain
28 chr1:145630000-145634800 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr1:145630200-145632800 Enhancers Brain Anterior Caudate brain
30 chr1:145630200-145636200 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr1:145630400-145632800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:145630400-145632800 Enhancers Skeletal Muscle Male skeletal muscle
33 chr1:145630400-145634600 Enhancers Skeletal Muscle Female skeletal muscle
34 chr1:145630600-145632800 Enhancers Brain Substantia Nigra brain
35 chr1:145630600-145633000 Enhancers Hela-S3 cervix
36 chr1:145630600-145636200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:145630600-145637600 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:145630600-145649200 Weak transcription NHDF-Ad bronchial
39 chr1:145630600-145652000 Weak transcription Gastric stomach
40 chr1:145630800-145633200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:145630800-145633800 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr1:145630800-145634200 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr1:145630800-145646200 Weak transcription Right Ventricle heart
44 chr1:145630800-145649000 Weak transcription Rectal Smooth Muscle rectum
45 chr1:145631000-145636400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:145631000-145650000 Weak transcription Stomach Smooth Muscle stomach
47 chr1:145631200-145632600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:145631200-145633800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:145631200-145634000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:145631200-145634600 Enhancers Psoas Muscle Psoas

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Last update: Aug 31, 2015