Variant report

Variant rs12403817
Chromosome Location chr1:246494376-246494377
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246423400-246509000 Weak transcription Aorta Aorta
2 chr1:246441800-246506600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:246447600-246502800 Weak transcription Left Ventricle heart
4 chr1:246465600-246518800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:246473400-246519200 Weak transcription Pancreas Pancrea
6 chr1:246474600-246504800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:246481000-246507400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:246482800-246494400 Weak transcription Fetal Lung lung
9 chr1:246483600-246496200 Weak transcription Primary T cells fromperipheralblood blood
10 chr1:246484400-246498400 Weak transcription Liver Liver
11 chr1:246484600-246501400 Weak transcription HUVEC blood vessel
12 chr1:246486600-246497600 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr1:246488400-246497000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:246488400-246518600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:246488400-246518600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:246488600-246496600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:246490000-246499200 Weak transcription Colonic Mucosa Colon
18 chr1:246490200-246499600 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr1:246490400-246500200 Weak transcription Brain Substantia Nigra brain
20 chr1:246491200-246509000 Weak transcription A549 lung
21 chr1:246492000-246503000 Weak transcription Psoas Muscle Psoas
22 chr1:246493000-246495800 Strong transcription Primary B cells from cord blood blood
23 chr1:246493000-246498800 Strong transcription Primary T cells from cord blood blood
24 chr1:246493400-246498400 Weak transcription Primary B cells from peripheral blood blood
25 chr1:246493400-246515200 Weak transcription Stomach Smooth Muscle stomach
26 chr1:246493400-246515200 Weak transcription Dnd41 blood
27 chr1:246493600-246495200 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr1:246493600-246495200 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:246493600-246495400 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr1:246493600-246495600 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:246493600-246498400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr1:246493600-246500600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:246493600-246502800 Weak transcription Primary hematopoietic stem cells blood
34 chr1:246493600-246502800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:246493600-246507400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:246493600-246507600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:246493800-246495400 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr1:246493800-246509000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:246493800-246513400 Weak transcription Osteobl bone
40 chr1:246494000-246495200 Weak transcription GM12878-XiMat blood
41 chr1:246494200-246495000 Enhancers K562 blood
42 chr1:246494200-246495400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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