Variant report

Variant rs12727205
Chromosome Location chr1:246495217-246495218
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246423400-246509000 Weak transcription Aorta Aorta
2 chr1:246441800-246506600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:246447600-246502800 Weak transcription Left Ventricle heart
4 chr1:246465600-246518800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:246473400-246519200 Weak transcription Pancreas Pancrea
6 chr1:246474600-246504800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:246481000-246507400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:246483600-246496200 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:246484400-246498400 Weak transcription Liver Liver
10 chr1:246484600-246501400 Weak transcription HUVEC blood vessel
11 chr1:246486600-246497600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:246488400-246497000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:246488400-246518600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:246488400-246518600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:246488600-246496600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:246490000-246499200 Weak transcription Colonic Mucosa Colon
17 chr1:246490200-246499600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:246490400-246500200 Weak transcription Brain Substantia Nigra brain
19 chr1:246491200-246509000 Weak transcription A549 lung
20 chr1:246492000-246503000 Weak transcription Psoas Muscle Psoas
21 chr1:246493000-246495800 Strong transcription Primary B cells from cord blood blood
22 chr1:246493000-246498800 Strong transcription Primary T cells from cord blood blood
23 chr1:246493400-246498400 Weak transcription Primary B cells from peripheral blood blood
24 chr1:246493400-246515200 Weak transcription Stomach Smooth Muscle stomach
25 chr1:246493400-246515200 Weak transcription Dnd41 blood
26 chr1:246493600-246495400 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:246493600-246495600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:246493600-246498400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:246493600-246500600 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:246493600-246502800 Weak transcription Primary hematopoietic stem cells blood
31 chr1:246493600-246502800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:246493600-246507400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:246493600-246507600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:246493800-246495400 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr1:246493800-246509000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:246493800-246513400 Weak transcription Osteobl bone
37 chr1:246494200-246495400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:246494600-246498800 Weak transcription Brain Angular Gyrus brain
39 chr1:246495000-246495600 Flanking Active TSS K562 blood
40 chr1:246495200-246495400 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr1:246495200-246495400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
42 chr1:246495200-246495600 Enhancers Fetal Heart heart
43 chr1:246495200-246497000 Enhancers GM12878-XiMat blood

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